Clone BO31279 Report

Search the DGRC for BO31279

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:312
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG15027-RA
Protein status:BO31279.pep: Imported from assembly
Sequenced Size:574

Clone Sequence Records

BO31279.complete Sequence

574 bp assembled on 2012-03-19

GenBank Submission: KX798117

> BO31279.complete
GAAGTTATCAGTCGACATGACGAATCTGCGCAAGGAACTGGAGAAATGCA
AGCACCCCAACAGCCGGAAAACCAAGGCGCTGGGCAAGAAGGCACGTCGC
CAAAACAACAAGCACAAGGTCCGTTTGGGTCATGCCATCAAAAGCAACAT
CACTGGCGAGAAGTTGAGCTGGTTTCTCGGCCAAATCGATGAGGGACGCA
CTGAACCGCTGAGGCCGCAGGAGCTGGAGGATCTGATTGAGCTCTATTTT
ACGCGATTCGACGAGGAGCTGGAGCAGATTAACCTAAAGCAGTCGATTGG
CAAACATCGGGCCAATCAGCATGCCGCCCGCAAGGATGTGATCACCATGA
CGCTGGAGAAGGAGCGCAACGAATTCCGCACTGGCGGTCTGGAGCTGATG
AACCTCTGCGATCCACTCAAGCTGAAAATGCTGCGCGATTGGGACGGCAG
TGCGCTCAGTGTGCAGCACCTGAAACTCGACCTAGTCTCCTATAACATGC
TGCAGCGGCTGAAGGAGCAGTCTAAGAAAAAAGAAACCAGCGAGCAGATG
GAAACAGCAAGCTTTCTAGACCAT

BO31279.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15027-RA 543 CG15027-PA 1..540 17..556 2700 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:03:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15027-RA 602 CG15027-RA 38..577 17..556 2700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15085184..15085721 556..19 2690 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:03:56 has no hits.

BO31279.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-19 10:06:35 Download gff for BO31279.complete
Subject Subject Range Query Range Percent Splice Strand
CG15027-RA 18..557 17..558 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:08:36 Download gff for BO31279.complete
Subject Subject Range Query Range Percent Splice Strand
CG15027-RA 38..577 17..558 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:18:34 Download gff for BO31279.complete
Subject Subject Range Query Range Percent Splice Strand
CG15027-RA 38..577 17..558 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:18:34 Download gff for BO31279.complete
Subject Subject Range Query Range Percent Splice Strand
X 15085182..15085722 17..558 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:08:36 Download gff for BO31279.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14979215..14979755 17..558 99   Minus

BO31279.pep Sequence

Translation from 16 to 574

> BO31279.pep
MTNLRKELEKCKHPNSRKTKALGKKARRQNNKHKVRLGHAIKSNITGEKL
SWFLGQIDEGRTEPLRPQELEDLIELYFTRFDEELEQINLKQSIGKHRAN
QHAARKDVITMTLEKERNEFRTGGLELMNLCDPLKLKMLRDWDGSALSVQ
HLKLDLVSYNMLQRLKEQSKKKETSEQMETASFLDH

BO31279.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15027-PA 180 CG15027-PA 1..180 1..180 929 100 Plus