BO31302.complete Sequence
610 bp assembled on 2012-03-26
GenBank Submission: KX797833
> BO31302.complete
GAAGTTATCAGTCGACATGTTGCCAATAATCTGGTGGTTCGGCATTATAG
TATGCAGTCTAGATACCGCAGATACCGCTAAGCTGATTCCAAACATGGGC
TACTATATAGAAATGAAGCAAATGGATTGCGTGGGCAATCCCAACTATTT
CGCGAACCTGTACTGCAGGATTATACCACCCAAAAACCGGACCATGGAGG
CTTCTGTGAATATTATGCAACAGTTGAGTGTTTTCAGTGGTTCACTTCGA
GTGTCCATACCCAATGCCAAGAAGGTCATAACCCAGATATTCGACATCAC
CTTCGATGTGTGCAAGGTGCTGCGGGAACGCAAGCGGAAGATTCTCATCG
ATCTTTTGGTCAACACTTTGGCCAAGAACAGCAATGCAAAGGCTTGGAGA
TGTCCTTTTCCAAAGGGTAAATTTGAGTCGAGAAACATTTCGGTTACCGA
TCTGCCGCCAATGCTAACCGAATCGGAGTTTTTTGTGAACTTGGACTTCT
TTATACCCAAGGTGGCCATTGCCATGAATGTCACCTTACATGGGCATCTC
TTTGAGATTGCAAAGGAAAGGAACAGGCGGAAGAAATATTTGGCAAGCTT
TCTAGACCAT
BO31302.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:11:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30050-RB | 579 | CG30050-PB | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30050-RB | 670 | CG30050-RB | 11..586 | 17..592 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12409101..12409425 | 92..416 | 1625 | 100 | Plus |
| 2R | 25286936 | 2R | 12409473..12409651 | 414..592 | 895 | 100 | Plus |
| 2R | 25286936 | 2R | 12408964..12409038 | 17..91 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:11:35 has no hits.
BO31302.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:48 Download gff for
BO31302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30050-RB | 16..586 | 22..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:38 Download gff for
BO31302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30050-RB | 16..586 | 22..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:04 Download gff for
BO31302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30050-RB | 16..586 | 22..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:04 Download gff for
BO31302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12408969..12409038 | 22..91 | 100 | -> | Plus |
| 2R | 12409101..12409424 | 92..415 | 100 | -> | Plus |
| 2R | 12409475..12409651 | 416..594 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:38 Download gff for
BO31302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8296980..8297156 | 416..594 | 98 | | Plus |
| arm_2R | 8296474..8296543 | 22..91 | 100 | -> | Plus |
| arm_2R | 8296606..8296929 | 92..415 | 100 | -> | Plus |
BO31302.pep Sequence
Translation from 16 to 610
> BO31302.pep
MLPIIWWFGIIVCSLDTADTAKLIPNMGYYIEMKQMDCVGNPNYFANLYC
RIIPPKNRTMEASVNIMQQLSVFSGSLRVSIPNAKKVITQIFDITFDVCK
VLRERKRKILIDLLVNTLAKNSNAKAWRCPFPKGKFESRNISVTDLPPML
TESEFFVNLDFFIPKVAIAMNVTLHGHLFEIAKERNRRKKYLASFLDH
BO31302.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30050-PB | 192 | CG30050-PB | 1..192 | 1..192 | 1006 | 100 | Plus |
| CG33627-PA | 183 | CG33627-PA | 29..179 | 34..185 | 170 | 24.7 | Plus |
| CG33626-PB | 167 | CG33626-PB | 10..167 | 29..180 | 169 | 26.2 | Plus |
