Clone BO31307 Report

Search the DGRC for BO31307

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:7
Vector:pDNR-Dual
Associated Gene/Transcriptsol-RC
Protein status:BO31307.pep: Imported from assembly
Sequenced Size:3034

Clone Sequence Records

BO31307.complete Sequence

3034 bp assembled on 2012-04-06

GenBank Submission: KX794483

> BO31307.complete
GAAGTTATCAGTCGACATGCATGATCCAGGGAGCAGCAGCCGCCTATCAG
GAGCCGCATCCGCAGCAGCAGGGACCGCGTCAGCTGGAGCTATAGCTGCA
GCCGTAGGAGCAGCTGCTGCCTCGCGGCACGACAATAAGACACAGCTTGG
CAACGGCAGCCGCAGTAAGATGTGGATATGCATCAAATGTTCCTATGCCT
ACAACCGACTCTGGCTCCAGACTTGCGAGATGTGCGAGGCCAAAGCCGAA
CAGCAGCAACAGCAGTTGCAGCTGCAACAGCAGCAGCAGCAGCAGCAGCA
GCACCACCACCACCACTTGCAGCAGCAACAGGCAGAAGCACCCCGCGACG
AGCCATGGACCTGCAAGAAGTGCACCCTGGTTAACTACTCGACAGCAATG
GCCTGCGTGGTGTGCGGCGGCTCCAAGCTGAAAAGCATCTCTTCCATCGA
GGACATGACGTTGCGAAAGGGCGAGTTCTGGACCTGCAGCCACTGTACGC
TCAAGAACTCGCTGCACTCGCCGGTCTGCAGTGCCTGCAAGTCCCACCGC
CAGCCGCAGCTCTCGATGGCCATGGAGGCGGTACGGGAGCGACCGGATGG
TCAGTCGTACGAGGAGCAGGATGCTGCAGCCGTCGGGGGCGGAGGAGGCA
GTGCCCACCAATCGGGCGCCAATGAGGTCAAGGCGCCTACAGCCTTGAAC
CTACCGCTAACTTCGGTGGCGTTGCCCATGCCCATGCTGCAGCTTCCAAC
GTCAACAGCGGCTGGTCTGCGCGGCTCACGCAGTCCCTCGCCCAGGATGC
AGCTGCTGCCATCACTCCAGCAGCAGAGGAACTCCAGCTCATCGGGCGCT
ATACCTAAACGTCACAGCACCGGCGGCTCCATTGTGCCACGGAACATTTC
CATCGCTGGTCTGGCCAATTACAATTTGCAGCAGGGCCAGGGAGTCGGCT
CCGCATCGGTAGTGTCTGCTTCTGGAGCTGGATCTGGAGCTGGAGCTGTC
GGAGCCAGTACCAGCACAAAGAAGTGGCAGTGTCCCGCGTGCACGTACGA
TAACTGTGCCGCTTCCGTCGTTTGTGACATCTGCTCGAGTCCGCGCGGCC
TGGCGAGCGCAGTTTTGGGCGAGGCGTTGGGCAGAAAGTCCGTTCGAGTT
GCCCTCACACCGGCAGATATTCGGCAGGAGAGCAAGCTGATGGAGAACCT
TCGCCAGCTGGAGGAGACCGAAGCGTTGACCAAGTGGCAAAACATCATAC
AGTACTGTCGCGACAATAGCGAGCTTTTCGTGGACGATTCGTTTCCGCCG
GCGCCGAAGAGTCTGTACTACAATCCGGCGAGCGGAGCAGGCGAGGGAAA
TCCTGTGGTGCAGTGGCGACGGCCGCACGAGATTAACTGCGACGGCGGAG
CGTATCCACCGTGGGCTGTGTTCCGCACCCCGCTGCCCTCGGACATCTGC
CAGGGCGTCTTGGGCAACTGCTGGCTACTCAGTGCGCTGGCGGTGCTGGC
GGAGCGCGAAGATCTGGTCAAGGAGGTGCTGGTCACGAAGGAGATATGTG
GCCAGGGCGCATACCAGGTGCGCCTCTGCAAAGACGGCAAGTGGACGACG
GTGCTGGTGGATGATCTGCTGCCATGCGACAAGCGTGGCCATCTGGTTTA
TTCGCAGGCCAAGCGCAAGCAGCTATGGGTGCCGCTGATCGAGAAGGCTG
TGGCCAAGATCCACGGCTGCTACGAGGCGCTGGTCTCGGGCCGGGCGATC
GAGGGACTGGCCACGCTGACAGGAGCGCCTTGCGAGAGCATTCCACTACA
GGCCAGTAGCTTGCCCATGCCCAGCGAGGACGAACTGGACAAGGACCTGA
TATGGGCCCAGCTGCTGAGCTCTCGATGCGTACGATTCCTCATGGGCGCC
AGCTGTGGCGGTGGCAACATGAAGGTGGACGAGGAGGAGTACCAGCAGAA
GGGGCTGCGCCCGCGACACGCCTACTCGGTGCTGGACGTGAAGGACATCC
AGGGACATCGCCTGCTCAAGCTACGCAATCCGTGGGGTCACTATTCGTGG
CGTGGCGATTGGTCGGATGACTCCTCGCTGTGGACGGACGATCTTCGGGA
TGCTCTGATGCCGCACGGCGCCAGCGAGGGCGTCTTCTGGATCTCGTTCG
AGGATGTGCTTAACTACTTCGACTGCATCGATATCTGCAAGGTGCGCTCC
GGCTGGAACGAGGTGCGTCTGCAGGGGACATTGCAGCCCCTGTGCTCCAT
CTCCTGTGTGCTGCTCACCGTGCTGGAGCCGACGGAGGCGGAGTTTACCC
TATTCCAGGAGGGGCAGCGCAACTCGGAGAAGTCGCAGCGATCGCAGCTG
GACCTGTGCGTTGTGATATTCCGCACCCGGTCTCCGGCGGCGCCGGAAAT
CGGTCGATTAGTGGAGCACAGCAAGCGTCAGGTGCGAGGCTTTGTGGGAT
GCCACAAGATGCTGGAGCGGGACATTTACCTGCTTGTGTGTCTGGCCTTC
AACCATTGGCACACGGGCATCGAGGATCCCCACCAGTATCCTCAATGCAT
CCTAGCGATACACAGCTCCAAGCGTCTGCTGGTGGAGCAGATAAGTCCCT
CGCCGCATCTCCTGGCCGACGCTATCATTAGCCTGACCCTAACCAAGGGA
CAGCGGCACGAGGGGCGCGAGGGGATGACCGCCTACTATCTGACCAAGGG
CTGGGCGGGTCTGGTTGTGATGGTGGAAAATAGACATGAGAATAAGTGGA
TCCATGTGAAATGTGATTGCCAGGAGAGCTACAATGTGGTGTCGACACGC
GGCGAACTCAAGACAGTGGACTCTGTGCCCCCGCTGCAGAGACAAGTAAT
CATCGTTCTCACCCAACTAGAGGGCAGTGGCGGCTTCAGCATCGCCCACC
GGCTGACCCATCGTCTGGCGAATTCCCGCGGCCTGCACGACTGGGGGCCA
CCCGGCGCCACCCACTGCCCGCCCATCGAGAATGTCCATGGACTGCACGC
TCCGCGGCTAATCACCGCAAGCTTTCTAGACCAT

BO31307.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:24:14
Subject Length Description Subject Range Query Range Score Percent Strand
sol-RF 4548 CG1391-PF 1546..4545 17..3016 15000 100 Plus
sol-RB 4785 CG1391-PB 1783..4782 17..3016 15000 100 Plus
sol-RE 4782 CG1391-PE 1783..4779 17..3016 14920 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:24:16
Subject Length Description Subject Range Query Range Score Percent Strand
sol-RF 5153 CG1391-RF 1673..4672 17..3016 15000 100 Plus
sol-RB 5592 CG1391-RB 2112..5111 17..3016 15000 100 Plus
sol-RA 4990 CG1391-RA 1510..4509 17..3016 15000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21354477..21356072 333..1928 7980 100 Plus
X 23542271 X 21356138..21356650 1922..2434 2565 100 Plus
X 23542271 X 21354095..21354413 17..335 1595 100 Plus
X 23542271 X 21356705..21356974 2430..2699 1350 100 Plus
X 23542271 X 21357255..21357431 2840..3016 885 100 Plus
X 23542271 X 21357043..21357187 2697..2841 725 100 Plus
Blast to na_te.dros performed 2014-11-28 04:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 629..712 135..52 186 69 Minus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 660..734 116..42 132 64 Minus

BO31307.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:46:53 Download gff for BO31307.complete
Subject Subject Range Query Range Percent Splice Strand
sol-RD 1697..4696 17..3018 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:46 Download gff for BO31307.complete
Subject Subject Range Query Range Percent Splice Strand
sol-RC 1510..4509 17..3018 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:51 Download gff for BO31307.complete
Subject Subject Range Query Range Percent Splice Strand
sol-RA 1510..4509 17..3018 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:51 Download gff for BO31307.complete
Subject Subject Range Query Range Percent Splice Strand
X 21357257..21357431 2842..3018 98   Plus
X 21354095..21354413 17..335 100 -> Plus
X 21354480..21356068 336..1924 100 -> Plus
X 21356141..21356647 1925..2431 100 -> Plus
X 21356707..21356973 2432..2698 100 -> Plus
X 21357045..21357187 2699..2841 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:46 Download gff for BO31307.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21225122..21225440 17..335 100 -> Plus
arm_X 21225507..21227095 336..1924 100 -> Plus
arm_X 21227168..21227674 1925..2431 100 -> Plus
arm_X 21227734..21228000 2432..2698 100 -> Plus
arm_X 21228072..21228214 2699..2841 100 -> Plus
arm_X 21228284..21228458 2842..3018 98   Plus

BO31307.pep Sequence

Translation from 16 to 3034

> BO31307.pep
MHDPGSSSRLSGAASAAAGTASAGAIAAAVGAAAASRHDNKTQLGNGSRS
KMWICIKCSYAYNRLWLQTCEMCEAKAEQQQQQLQLQQQQQQQQQHHHHH
LQQQQAEAPRDEPWTCKKCTLVNYSTAMACVVCGGSKLKSISSIEDMTLR
KGEFWTCSHCTLKNSLHSPVCSACKSHRQPQLSMAMEAVRERPDGQSYEE
QDAAAVGGGGGSAHQSGANEVKAPTALNLPLTSVALPMPMLQLPTSTAAG
LRGSRSPSPRMQLLPSLQQQRNSSSSGAIPKRHSTGGSIVPRNISIAGLA
NYNLQQGQGVGSASVVSASGAGSGAGAVGASTSTKKWQCPACTYDNCAAS
VVCDICSSPRGLASAVLGEALGRKSVRVALTPADIRQESKLMENLRQLEE
TEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQW
RRPHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDL
VKEVLVTKEICGQGAYQVRLCKDGKWTTVLVDDLLPCDKRGHLVYSQAKR
KQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSLP
MPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPR
HAYSVLDVKDIQGHRLLKLRNPWGHYSWRGDWSDDSSLWTDDLRDALMPH
GASEGVFWISFEDVLNYFDCIDICKVRSGWNEVRLQGTLQPLCSISCVLL
TVLEPTEAEFTLFQEGQRNSEKSQRSQLDLCVVIFRTRSPAAPEIGRLVE
HSKRQVRGFVGCHKMLERDIYLLVCLAFNHWHTGIEDPHQYPQCILAIHS
SKRLLVEQISPSPHLLADAIISLTLTKGQRHEGREGMTAYYLTKGWAGLV
VMVENRHENKWIHVKCDCQESYNVVSTRGELKTVDSVPPLQRQVIIVLTQ
LEGSGGFSIAHRLTHRLANSRGLHDWGPPGATHCPPIENVHGLHAPRLIT
ASFLDH

BO31307.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
sol-PF 1515 CG1391-PF 516..1515 1..1000 5323 100 Plus
sol-PB 1594 CG1391-PB 595..1594 1..1000 5323 100 Plus
sol-PE 1593 CG1391-PE 595..1593 1..1000 5306 99.9 Plus
CalpA-PA 565 CG7563-PA 25..386 361..726 363 30.1 Plus
CalpA-PC 828 CG7563-PC 25..386 361..726 363 30.1 Plus