Clone BO31317 Report

Search the DGRC for BO31317

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG42761-RA
Protein status:BO31317.pep: Imported from assembly
Sequenced Size:373

Clone Sequence Records

BO31317.complete Sequence

373 bp assembled on 2012-03-26

GenBank Submission: KX797228

> BO31317.complete
GAAGTTATCAGTCGACATGAGTACACTTCGTTGCTGCATTGTTATTCTTT
TTGGAATACTGATTTTTGGAGTGGCAGTGGCTGAAAACAATAAGTTTCAG
GATGAAAGGGATGAACATCATTTTCAGCCCGATGAAGTAAAAAGTTCAGA
TGAAGCTATAGAACGGATACGACGTCAGATTGGAGCTTTTGGAATTGGCG
CTGGATTTTATGGAGGAAGGCATGTTGATTCAATCGGTAATCCCTATTAT
GGGGCTCCATATGGAAATTCCTACTTTGTTCAACCTTACTGGCATTACTT
CCATGATCGCAGATTTGGAGCCAACTACGGTTTCGGTGGACATTTCTATG
GTCGCGCAAGCTTTCTAGACCAT

BO31317.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 04:12:02 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG9759-RC 1877 CG9759-RC 857..1195 17..355 1695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13608052..13608390 355..17 1695 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:12:01 has no hits.

BO31317.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:53 Download gff for BO31317.complete
Subject Subject Range Query Range Percent Splice Strand
CG42761-RA 1..339 17..357 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:50 Download gff for BO31317.complete
Subject Subject Range Query Range Percent Splice Strand
CG42761-RA 1..339 17..357 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:14 Download gff for BO31317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RC 857..1195 17..357 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:14 Download gff for BO31317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13608050..13608390 17..357 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:50 Download gff for BO31317.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9433772..9434112 17..357 99   Minus

BO31317.pep Sequence

Translation from 16 to 373

> BO31317.pep
MSTLRCCIVILFGILIFGVAVAENNKFQDERDEHHFQPDEVKSSDEAIER
IRRQIGAFGIGAGFYGGRHVDSIGNPYYGAPYGNSYFVQPYWHYFHDRRF
GANYGFGGHFYGRASFLDH
Sequence BO31317.pep has no blast hits.