Clone BO31319 Report

Search the DGRC for BO31319

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG18431-RA
Protein status:BO31319.pep: Imported from assembly
Sequenced Size:616

Clone Sequence Records

BO31319.complete Sequence

616 bp assembled on 2012-03-26

GenBank Submission: KX797681

> BO31319.complete
GAAGTTATCAGTCGACATGGCCAAAATCGTACTCTTCTGCCTGCTGAGCC
TCTTGGCATGCGCTGCAGGTCAACGCATTACGACAATCCACCTGGATGGA
GTGCAGTACTTCATCAGCCGAATGAATCCCTACTCCCCGGAGCTCAACTA
CTTCCTGGCCTACCAGTACTGTCGCTCCCTGGGCCTGCAACTGGCCTCCT
TTGAGACGAAGGAGAAGGCCGAGTCGATGACCACGTATCTGAAGAATGCC
GGTTACGGCAACTACGATTTCTGGACCTCCGGCAATCGCCTGGGCACGGG
CATGTTCCTATGGATGAGCACTGGTCTGCCGTTTAACGCCACTTTTGATT
TCTTCGAAAACTCGGCGGACGCCATCCAGGCCGGTCTGCTCGATCCCGTC
GATCATAATAGCAACACCTCACCCCAGCGCACCGCTCGCGACAGCAGCAG
TGGCGCCGAGAAGGGATGCGTGATCCTGAAGCAGCCCACGCTCAAGTGGA
TGCCCGAGGACTGCTCGGCCGTGAAGGACTTCATTTGTGAGCAGACCCGC
TGCTACTACTACAACTACGGCAGCATCCCCGTCTCGTCGGCGCAGGGGGC
AAGCTTTCTAGACCAT

BO31319.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-RD 585 CG43164-PD 1..582 17..598 2910 100 Plus
CG43164-RA 585 CG43164-PA 1..582 17..598 2910 100 Plus
CG43164-RC 1476 CG43164-PC 1..581 17..597 2905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-RD 1962 CG43164-RD 233..814 17..598 2910 100 Plus
CG43164-RA 2450 CG43164-RA 233..814 17..598 2910 100 Plus
CG43164-RC 2338 CG43164-RC 556..1136 17..597 2905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17505634..17506011 67..444 1890 100 Plus
2R 25286936 2R 17506154..17506311 441..598 790 100 Plus
2R 25286936 2R 17502909..17502962 17..70 270 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:12:05 has no hits.

BO31319.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:53 Download gff for BO31319.complete
Subject Subject Range Query Range Percent Splice Strand
CG18431-RA 182..763 17..600 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:52 Download gff for BO31319.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RA 233..814 17..600 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:16 Download gff for BO31319.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RA 233..814 17..600 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:16 Download gff for BO31319.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17502909..17502960 17..68 100 -> Plus
2R 17505636..17506011 69..444 100 -> Plus
2R 17506158..17506311 445..600 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:52 Download gff for BO31319.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13390414..13390465 17..68 100 -> Plus
arm_2R 13393141..13393516 69..444 100 -> Plus
arm_2R 13393663..13393816 445..600 98   Plus

BO31319.pep Sequence

Translation from 16 to 616

> BO31319.pep
MAKIVLFCLLSLLACAAGQRITTIHLDGVQYFISRMNPYSPELNYFLAYQ
YCRSLGLQLASFETKEKAESMTTYLKNAGYGNYDFWTSGNRLGTGMFLWM
STGLPFNATFDFFENSADAIQAGLLDPVDHNSNTSPQRTARDSSSGAEKG
CVILKQPTLKWMPEDCSAVKDFICEQTRCYYYNYGSIPVSSAQGASFLDH

BO31319.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-PD 194 CG43164-PD 1..194 1..194 1039 100 Plus
CG43164-PA 194 CG18431-PA 1..194 1..194 1039 100 Plus
CG43164-PC 491 CG43164-PC 1..194 1..194 1039 100 Plus
CG43164-PB 193 CG18431-PB 1..193 1..194 1023 99.5 Plus
CG43164-PE 490 CG43164-PE 1..193 1..194 1023 99.5 Plus