BO31321.complete Sequence
514 bp assembled on 2012-03-26
GenBank Submission: KX799251
> BO31321.complete
GAAGTTATCAGTCGACATGTGGCTCTGGGACTATATTATGCTAATCAGAC
AGCGACAGGAGACGCGGCGCAATGTCAGAGTTCCCTTGGTTTACCTCGGC
ATAGGTGCTGTTGGTCTGTGCGCCATCTACCTGATCTTTGGCTGGGGCGC
CCAACTACTGTGCAACATCATTGGGGTTCTGTACCCTGCATATATTTCCA
TCCATGCCATCGAGTCCAGCACAAAGCAGGACGACACCAAGTGGCTGATC
TACTGGGTCACGTTTGGAATCTTCACCGTGATTGAATTCTTTTCGAGTCT
GCTAACTTCGGTGATTCCCTTTTACTGGCTGCTGAAGTGTGCTTTCCTCA
TCTGGTGCATGCTGCCCACGGAACAGAATGGTTCTACCATCATCTACAAC
AAGCTGGTGCGACCCTACTTCCTGAAACATCACGAATCCGTTGACAGGAT
CATCGATGATGGCATGAAGAAAGCCGCTGGAGTGCTGAAGCATGACGCAA
GCTTTCTAGACCAT
BO31321.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8331-RB | 483 | CG8331-PB | 1..480 | 17..496 | 2400 | 100 | Plus |
| CG8331-RD | 537 | CG8331-PD | 142..534 | 104..496 | 1965 | 100 | Plus |
| CG8331-RC | 462 | CG8331-PC | 67..459 | 104..496 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:12:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8331-RB | 877 | CG8331-RB | 205..684 | 17..496 | 2400 | 100 | Plus |
| CG8331-RD | 846 | CG8331-RD | 261..653 | 104..496 | 1965 | 100 | Plus |
| CG8331-RC | 1023 | CG8331-RC | 438..830 | 104..496 | 1965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14172287..14172522 | 102..337 | 1180 | 100 | Plus |
| 3R | 32079331 | 3R | 25786726..25787057 | 450..119 | 1090 | 88.6 | Minus |
| 2R | 25286936 | 2R | 14172582..14172683 | 336..437 | 510 | 100 | Plus |
| 2R | 25286936 | 2R | 14171364..14171454 | 17..107 | 455 | 100 | Plus |
| 2R | 25286936 | 2R | 14172747..14172805 | 438..496 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:12:08 has no hits.
BO31321.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:54 Download gff for
BO31321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8331-RB | 222..701 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:54 Download gff for
BO31321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8331-RB | 205..684 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:18 Download gff for
BO31321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8331-RB | 205..684 | 17..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:18 Download gff for
BO31321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14171364..14171451 | 17..104 | 100 | -> | Plus |
| 2R | 14172290..14172522 | 105..337 | 100 | -> | Plus |
| 2R | 14172584..14172683 | 338..437 | 100 | -> | Plus |
| 2R | 14172747..14172805 | 438..498 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:54 Download gff for
BO31321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10058869..10058956 | 17..104 | 100 | -> | Plus |
| arm_2R | 10059795..10060027 | 105..337 | 100 | -> | Plus |
| arm_2R | 10060089..10060188 | 338..437 | 100 | -> | Plus |
| arm_2R | 10060252..10060310 | 438..498 | 96 | | Plus |
BO31321.pep Sequence
Translation from 16 to 514
> BO31321.pep
MWLWDYIMLIRQRQETRRNVRVPLVYLGIGAVGLCAIYLIFGWGAQLLCN
IIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVI
PFYWLLKCAFLIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVDRIIDDGM
KKAAGVLKHDASFLDH
BO31321.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8331-PB | 160 | CG8331-PB | 1..160 | 1..160 | 862 | 100 | Plus |
| CG8331-PD | 178 | CG8331-PD | 40..178 | 22..160 | 711 | 95.7 | Plus |
| CG8331-PA | 178 | CG8331-PA | 40..178 | 22..160 | 711 | 95.7 | Plus |
| CG8331-PC | 153 | CG8331-PC | 20..153 | 27..160 | 707 | 98.5 | Plus |
| CG4960-PB | 174 | CG4960-PB | 43..174 | 22..160 | 538 | 72.7 | Plus |
