Clone BO31322 Report

Search the DGRC for BO31322

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG10508-RH
Protein status:BO31322.pep: Imported from assembly
Sequenced Size:556

Clone Sequence Records

BO31322.complete Sequence

556 bp assembled on 2012-04-24

GenBank Submission: KX794699

> BO31322.complete
GAAGTTATCAGTCGACATGAGCGAATCCGGTGGCTATCAGAAAATGCCGC
CCGGCTGGGACTGCAAATACGATCAAGCAACTGGAAATTGCTATTACATA
AACTATCTGACGAAGGCCATGCAGCTGGAGGATCCGCGCGGCCGCAGTTA
CAGGCAGTTGCAGAACGAACGCTGTTCCACGGAGTCGATAGCCTTGCAGC
AGTTGGTCAGTCAGCCGCAGACGTCGCACAACAGCTCGCCGTACCACGTC
CATCCCAGCAACAACTTGACTGCAATTCGGGCCTTCCAGGAGCGCCAGCA
ACCCACGCTGCACAACATCTCTACCAGTCCATTGTTGTCGGCCTCCTCCA
GGGGACACTTGGAAATGTCTTCACCTCTGCCCTTTCAACGAGCTCGCGTG
GGACCGAATCTCTCGCGGCGCTCCACCATTCAGGAGACCTCGTTCACCAC
GCAAGCGGAAACGGATGCCGTGGTGACCAAAATCCAGAACATGTTCCCCA
CCGCTGGCGAGAACCATATACGTCTCCTGCTCAAGCGGGCAAGCTTTCTA
GACCAT

BO31322.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG10508-RL 1338 CG10508-PL 1..521 17..537 2605 100 Plus
CG10508-RK 2202 CG10508-PK 1..521 17..537 2605 100 Plus
CG10508-RJ 2199 CG10508-PJ 1..518 17..537 2525 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10508-RL 2122 CG10508-RL 517..1037 17..537 2605 100 Plus
CG10508-RK 2986 CG10508-RK 517..1037 17..537 2605 100 Plus
CG10508-RJ 2983 CG10508-RJ 517..1034 17..537 2525 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:16:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21212781..21212958 361..538 890 100 Plus
3L 28110227 3L 21212224..21212389 197..362 830 100 Plus
3L 28110227 3L 21212049..21212158 90..199 550 100 Plus
3L 28110227 3L 21210731..21210804 17..90 370 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:16:48 has no hits.

BO31322.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:02:02 Download gff for BO31322.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RH 503..1024 17..540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:01 Download gff for BO31322.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RL 517..1037 17..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:35 Download gff for BO31322.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RK 517..1038 17..540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:35 Download gff for BO31322.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21210731..21210804 17..90 100 -> Plus
3L 21212050..21212158 91..199 100 -> Plus
3L 21212227..21212388 200..361 100 -> Plus
3L 21212782..21212958 362..540 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:01 Download gff for BO31322.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21203831..21203904 17..90 100 -> Plus
arm_3L 21205150..21205258 91..199 100 -> Plus
arm_3L 21205327..21205488 200..361 100 -> Plus
arm_3L 21205882..21206058 362..540 98   Plus

BO31322.pep Sequence

Translation from 16 to 556

> BO31322.pep
MSESGGYQKMPPGWDCKYDQATGNCYYINYLTKAMQLEDPRGRSYRQLQN
ERCSTESIALQQLVSQPQTSHNSSPYHVHPSNNLTAIRAFQERQQPTLHN
ISTSPLLSASSRGHLEMSSPLPFQRARVGPNLSRRSTIQETSFTTQAETD
AVVTKIQNMFPTAGENHIRLLLKRASFLDH

BO31322.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10508-PL 445 CG10508-PL 1..174 1..174 913 100 Plus
CG10508-PK 733 CG10508-PK 1..174 1..174 913 100 Plus
CG10508-PJ 732 CG10508-PJ 1..173 1..174 896 99.4 Plus