Clone BO31325 Report

Search the DGRC for BO31325

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG33108-RB
Protein status:BO31325.pep: Imported from assembly
Sequenced Size:574

Clone Sequence Records

BO31325.complete Sequence

574 bp assembled on 2012-03-26

GenBank Submission: KX794562

> BO31325.complete
GAAGTTATCAGTCGACATGTCGAATATTTCAAGTGTGGCACCACCTCCTC
CCCCACCACCCATGATAGTCACTCCTAGCACACCTGCTACCACAAAGGAA
CGTCCAGTTGGGGACAATATAACCACCGATGAGTGCACTTGGGCATGTGA
GTATCCTGAGGTGCAGAAAGGATGCTATTTAAGTCGCGTCTGCCAATATA
CACCACCGAAACACTGTCAATACTACTCCGTAAACAGCATAGTGCAGGTG
GGACCTACTTGTGGCTTAGTGGCCCTCAGCATGTTGCTTGGTGGCAGTCC
CACGGCAGATGATCTCCTCAAGGATGCAATCGACCAGGAGTATACCCTTA
ATGGTGAACTATTTAGTGCTCAGTATTTGTTTGAACTGACCCGGAAGCAT
ATGCCAGGACCTGCTGCGTGTCAGTTGCATGTAGGTCCTTTGGACTGCAA
AAAAGTCAAGGAACTTTTAAAGGCCGGAGGCTGCCTACTAGTGCCGTATC
CTTTTTCAAAAATATTGCCATTTAAACCCGGGTTGAGTTTGGTATTCCCC
TGCATTGCAAGCTTTCTAGACCAT

BO31325.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33108-RB 543 CG33108-PB 1..540 17..556 2700 100 Plus
CG33108-RA 804 CG33108-PA 1..479 17..495 2395 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG33108-RB 725 CG33108-RB 77..617 16..556 2705 100 Plus
CG33108-RA 931 CG33108-RA 77..556 16..495 2400 100 Plus
LSm3-RA 643 CG31184-RA 1..79 478..556 395 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23996030..23996340 246..556 1555 100 Plus
3R 32079331 3R 23995735..23995969 16..250 1175 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:12:19 has no hits.

BO31325.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:56 Download gff for BO31325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33108-RB 67..606 17..558 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:57 Download gff for BO31325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33108-RB 78..617 17..558 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:22 Download gff for BO31325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33108-RB 78..617 17..558 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:22 Download gff for BO31325.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23995736..23995966 17..247 100 -> Plus
3R 23996032..23996340 248..558 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:57 Download gff for BO31325.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19821458..19821688 17..247 100 -> Plus
arm_3R 19821754..19822062 248..558 99   Plus

BO31325.pep Sequence

Translation from 16 to 574

> BO31325.pep
MSNISSVAPPPPPPPMIVTPSTPATTKERPVGDNITTDECTWACEYPEVQ
KGCYLSRVCQYTPPKHCQYYSVNSIVQVGPTCGLVALSMLLGGSPTADDL
LKDAIDQEYTLNGELFSAQYLFELTRKHMPGPAACQLHVGPLDCKKVKEL
LKAGGCLLVPYPFSKILPFKPGLSLVFPCIASFLDH

BO31325.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG33108-PB 180 CG33108-PB 1..180 1..180 983 100 Plus
CG33108-PA 267 CG33108-PA 1..161 1..161 880 100 Plus