BO31330.complete Sequence
1330 bp assembled on 2012-03-26
GenBank Submission: KX794266
> BO31330.complete
GAAGTTATCAGTCGACATGTTTAGGATCCACCTCAAGATGGGTCCCCAAC
GCAACCAGCTCCACAGCAACAACAACAATGGTGCCGCCGGAAGTAGCAGC
AGCACCGGAAACCGTCACCTGAAGGAGTTCACCTGCTGCTTCGGCCTGCA
TGTCCACACGGCCACTTTGATGATCGGATTGTGGCACCTGTTCTTGAACA
TATTGGCGCTAAGCGTTCTAGCGGTCATATGGCGCAATCCGGAGATGATG
GACGAACTGGAAGGTGGCACCCACGACTACACCGTGGATCTGAGTGCACC
GGCCCTACCCACGCCCCTTAGCAAGGTCGAACCGCCCTACGCCTACCGTG
ACCACTCCCTCAACTATCGTAAGCGTTACCAGAACTTCGATATGGGCGGA
CTGGTGTGCACCTGCATGATAGCCATTACACTGATGATGATCTACGGAAC
CATCAAGGGAAAACCCTCCCACCTGTTGCCGTTCTTCTGTTTGCAATTGT
TTGATTTCGCTATTACAACTCTCACCGCCGCTGGATATCTGTGCTACCTG
CAGGCCATTCACAGCATCATTGCCGAGTCGCATCGCTTGCCGTGGCGCGA
GAAGCTGCTAGAACTACCACCTGAGGAGCTAGTTGTTGTTGTCCTGGTCG
TATTCATCTGCATTGTGTTTCTAAAGGCCTATTGCATTGGTATCGTTTGG
CGCTGCTACAAGTACTTGACGCTCCGTCAGCAACACGTTCGCACCCTGTT
CCCCTTCCTGGAGCCACCGACTGGAGTCCACAGTGTTGGCGGAACCTTTG
GTGCCGAAGAGCGGTCTTACTCCACTCTGTTGCCCAATTACGATGAAGCG
ATTGCCCAGTACTTGAAGCAGGCACCACCGCCATCTTATCAGGTGGCCAT
GTCAAACTACGAAGAGGGTGAAGACGCAGCTGTTGGAGGTGCGGAGGTTA
ATCCTTCGGTGGCCCCTCTCTTCGTGGCCCTTGGAGCAGCCACTACCGCG
AACGTAGCCTCCAACACGGATGACAACATGGATAATAACAATGATCAGCC
GAACAATAACAACACTATGCATGTCAATGCCAATACGCCACCAATGCGCC
GCAGCGATGCAGCTGTAAACGCTAATGTCGACGAGGAAGCGGACGATTTG
GAGGTTATTGACGCTGGCGTTGATGTAATCGGTGGCATTCCGCCTCCTCC
GCCCTACAACGACGTTGCCGATGCCCAGGTGCAAGTGCCATCGCAATCGC
CGCTGCATCGCCAGCCAAACATCCCGGGACAAGTATTCGGCGGACGCGAC
GAAAGCCAGGCTGCAAGCTTTCTAGACCAT
BO31330.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:12:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14767-RB | 1299 | CG14767-PB | 1..1296 | 17..1312 | 6480 | 100 | Plus |
| CG14767-RC | 1299 | CG14767-PC | 1..1296 | 17..1312 | 6480 | 100 | Plus |
| CG14767-RA | 1287 | CG14767-PA | 1..1284 | 17..1312 | 6265 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:12:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14767-RB | 2043 | CG14767-RB | 68..1363 | 17..1312 | 6480 | 100 | Plus |
| CG14767-RC | 2132 | CG14767-RC | 157..1452 | 17..1312 | 6480 | 100 | Plus |
| CG14767-RA | 2120 | CG14767-RA | 157..1440 | 17..1312 | 6265 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:12:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8718697..8719489 | 1312..520 | 3965 | 100 | Minus |
| 2R | 25286936 | 2R | 8719843..8720033 | 380..190 | 955 | 100 | Minus |
| 2R | 25286936 | 2R | 8723257..8723430 | 190..17 | 870 | 100 | Minus |
| 2R | 25286936 | 2R | 8719646..8719784 | 519..381 | 695 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 04:12:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2388 | 44..118 | 127 | 65.3 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 136..196 | 43..102 | 122 | 68.9 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9166..9226 | 43..102 | 122 | 68.9 | Plus |
BO31330.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:59 Download gff for
BO31330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14767-RB | 207..1496 | 23..1314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:05 Download gff for
BO31330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14767-RC | 163..1452 | 23..1314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:30 Download gff for
BO31330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14767-RC | 163..1452 | 23..1314 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:30 Download gff for
BO31330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8718695..8719489 | 520..1314 | 99 | <- | Minus |
| 2R | 8719646..8719784 | 381..519 | 100 | <- | Minus |
| 2R | 8719843..8720032 | 191..380 | 100 | <- | Minus |
| 2R | 8723257..8723424 | 23..190 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:05 Download gff for
BO31330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4606200..4606994 | 520..1314 | 99 | <- | Minus |
| arm_2R | 4607151..4607289 | 381..519 | 100 | <- | Minus |
| arm_2R | 4607348..4607537 | 191..380 | 100 | <- | Minus |
| arm_2R | 4610762..4610929 | 23..190 | 100 | | Minus |
BO31330.pep Sequence
Translation from 16 to 1330
> BO31330.pep
MFRIHLKMGPQRNQLHSNNNNGAAGSSSSTGNRHLKEFTCCFGLHVHTAT
LMIGLWHLFLNILALSVLAVIWRNPEMMDELEGGTHDYTVDLSAPALPTP
LSKVEPPYAYRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMIYGTIKGKP
SHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESHRLPWREKLLEL
PPEELVVVVLVVFICIVFLKAYCIGIVWRCYKYLTLRQQHVRTLFPFLEP
PTGVHSVGGTFGAEERSYSTLLPNYDEAIAQYLKQAPPPSYQVAMSNYEE
GEDAAVGGAEVNPSVAPLFVALGAATTANVASNTDDNMDNNNDQPNNNNT
MHVNANTPPMRRSDAAVNANVDEEADDLEVIDAGVDVIGGIPPPPPYNDV
ADAQVQVPSQSPLHRQPNIPGQVFGGRDESQAASFLDH
BO31330.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14767-PB | 432 | CG14767-PB | 1..432 | 1..432 | 2301 | 100 | Plus |
| CG14767-PC | 432 | CG14767-PC | 1..432 | 1..432 | 2301 | 100 | Plus |
| CG14767-PA | 428 | CG14767-PA | 1..428 | 1..432 | 2264 | 99.1 | Plus |
