BO31331.complete Sequence
418 bp assembled on 2012-03-26
GenBank Submission: KX796806
> BO31331.complete
GAAGTTATCAGTCGACATGTCTCGCGATTTTTTCGCGCTGTTGGCAATTT
TCATCTTCACTGCGGTCAACGCGGCACCGCAAATTTCACCAACTATCGTT
CCGCAAATCCGCACAAATGGCTTTCAACTTGAGCCCCTCAATCAAGAATA
CTTTCTCAGAATCGAACATCCGGGTGGCACTATTCGCCAGGAATCCGTGA
GCCAGAATGAAGCCGGACATCTGCAGGTTAAAGGTGTGATTAACCAGCCC
TTCGAGGATCAGGATGCCAATCTTATTGTCACCTATGAGGCTGGTCCGAA
TGGATATGTTGCCAAATACAGCTTCGGCAAGGGTCCTCCAACACCGCCTC
CTGACACACCATTATTCCTCAGTCCCGGTGCTCTGAAAACTGCAGCGGGA
GCAAGCTTTCTAGACCAT
BO31331.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42561-RA | 387 | CG42561-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42561-RA | 566 | CG42561-RA | 29..413 | 16..400 | 1925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:12:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17685153..17685395 | 158..400 | 1215 | 100 | Plus |
| 2R | 25286936 | 2R | 17684973..17685095 | 37..159 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:12:38 has no hits.
BO31331.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:59 Download gff for
BO31331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42561-RA | 167..550 | 17..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:07 Download gff for
BO31331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42561-RA | 30..413 | 17..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:31 Download gff for
BO31331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42561-RA | 30..413 | 17..402 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:31 Download gff for
BO31331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17685155..17685395 | 160..402 | 99 | | Plus |
| 2R | 17684884..17684904 | 17..37 | 100 | -> | Plus |
| 2R | 17684974..17685095 | 38..159 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:07 Download gff for
BO31331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13572389..13572409 | 17..37 | 100 | -> | Plus |
| arm_2R | 13572479..13572600 | 38..159 | 100 | -> | Plus |
| arm_2R | 13572660..13572900 | 160..402 | 99 | | Plus |
BO31331.pep Sequence
Translation from 16 to 418
> BO31331.pep
MSRDFFALLAIFIFTAVNAAPQISPTIVPQIRTNGFQLEPLNQEYFLRIE
HPGGTIRQESVSQNEAGHLQVKGVINQPFEDQDANLIVTYEAGPNGYVAK
YSFGKGPPTPPPDTPLFLSPGALKTAAGASFLDH
BO31331.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42561-PA | 128 | CG42561-PA | 1..128 | 1..128 | 669 | 100 | Plus |
| CG42562-PA | 126 | CG42562-PA | 8..126 | 7..128 | 182 | 43.9 | Plus |
