BO31342.complete Sequence
2062 bp assembled on 2012-04-06
GenBank Submission: KX796398
> BO31342.complete
GAAGTTATCAGTCGACATGGCTGACCCCAATTTGCACGACAATCAAGTAA
TAAAAGATGGTGAATCTTCCGAAAGCTGGCCTGCATTCAATAGGAGGAGC
CCGAATCCCTCTTTCTCCAGCGTTGATCAACAAGGAAATAAAACTAAGGC
ACGAAGGCAGCACCAAAGCCGTTCACATTCTTTTCACTCAACAGCAAATA
GTGTTCCTGAATCGCAGGGACCTCTTGAATCTCGATCTGATCTGAACGCC
AAGACATCATCGAAAAGCGAACGACCATATATTTCCACATCCAATTCAAG
CTGGACCTCTGAATCCAGCTCCGGAAGTCCACCAGATTCAGGAGAATCGT
CTTCGTTTTCGACTTCATCTTCGCTTTCATCATCATTATTATGTGCTCCA
GAACCGAAATCTATTAACTGGAGCAACCCGAAATCTTCTTCAAATATCTC
AAATGAAACCACAACTTCTGCGGGACAGGTTGGCGGCATTCCGAGCTTTT
CAGAAAGTGATGACCAGGGAAGTGTCGACTCTGAAACAGTCTCTAACATC
AGAAAATCAACTTCCCTCATAGAACTTAAAGACAATTTCAATACAATCAT
TGACGAAGATAATAATCAACAGCTCTCTAACGAGGGCAACATATTGTCCC
CTGGGACAGTTTCTATTTCCAATTTTCCAAGCTCGAATGAAGTAGCAAAT
GGATTGATTGATGAGATGGAACAAGACCTACTCTCGAAGCAACATTCTAC
ATCGACCCCAATAAATAAAAGTAATACAATGGAAAAAGAATTGCTCCCAT
TGCAATGTTCTTCATTTCCACCGACATCATCCGAAGGTAATATTTTAAAA
CCCAGGGTCAATCCTGTGCCATTAGGTCCCAGCTCAAATACAGAGTATGA
ATCAAATGGAAAAAATTACAACATTGAAAAAAGGTTGTCCCAATTGCGAT
ATAGTTCAGATGAAAAGGAATCCGATGTCTTGTCGTATGCCTCTTCTGAT
AGTCTCGATTTAAATTTCGATTACGGTGATAATGCAAAGAATCAAAATGG
AAATGGAATGAATGGAGAGGTAAATGGTGATAAGGAGTCGCAAGTTCTTG
ATATAGAAGAACAACGCAAACCTTTTGAAAAAGATGTAGCAGTTAAGTTC
CAGACCACCATAACAACCCAAAATTGTGGACTTCTAAAAGGTCCATCGCA
GTTTCTGAAGATGCCTTATTTCATACCCGTGGAATCCAAGGCATACGTGC
CTGAAACCTTTCAGGATCGCATGACTAAGAATGATTTGAAGGACGAACAG
TCACGCGAGGATTTCATAAATCGTCTAAAGGCAACTGTTAGGTGGCGCGA
GAACGAAAACAAAACCAAGGAGTCCAATGCGAAAATTGTTCGTTGGTCCG
ATGGCAGCGAAACCTTTCATGTGGGCAACGAGGTTTTCGATATGATGCAT
CACCCGGTGACCGTTAACCAGAACCATTTGTATGTTCGCCTGGGCAGCTT
CTACCAGCCTCAGGGTTTGATCCAGAATAAGTTGACTGTGCGTCCCATGC
TGGACTCCAATTTCGGACAGAGTCATGTCCAGGCCTTGCGTAATCGAGCC
ACGAATAAGCCACAGTCTGGGTGCGTTAAGGTGATAACGAACATGGGCTC
CAATCCCGAGCACGATCATGATCGGCGCATGAAGGAGGAATTGTCCAAGC
TTCGCCAGGAGGGTCGTGAAAAGAATCGCGCGCTTATGAAGAATCATCCT
CCGAAACGTGACAGGCACTATCAAGGCTCCGATCACAATGTGGCCAAAAA
CGCAGGGGCATTCGAAGAGGACGACGGTGAGGGTGCAGATTGCGAGACAA
GCTCTGCATTGGAGGTTACGAATGAACCAATGCGCAGCGAGGAAGATACC
GAAGATCATATGGACGATGATGCTTCTTGGAGCTCACCCAATTCCCAGGA
GGAAGGAAAGCAATCGAGTTCCGAAGACGATCTCCCGATCGGAGGTGCTA
TCCGCAAGCCCACGCGTTTGGTCTATTCCGGATCAGATTCCGACGCAAGC
TTTCTAGACCAT
BO31342.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10887-RA | 2031 | CG10887-PA | 1..2028 | 17..2044 | 10140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10887-RA | 2188 | CG10887-RA | 102..2129 | 17..2044 | 10140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:24:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20115131..20117080 | 95..2044 | 9750 | 100 | Plus |
| 3R | 32079331 | 3R | 20115035..20115077 | 55..97 | 215 | 100 | Plus |
| 3R | 32079331 | 3R | 20114939..20114978 | 17..56 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:24:17 has no hits.
BO31342.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:46:54 Download gff for
BO31342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10887-RA | 1..2028 | 17..2046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:48 Download gff for
BO31342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10887-RA | 102..2129 | 17..2046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:53 Download gff for
BO31342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10887-RA | 102..2129 | 17..2046 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:53 Download gff for
BO31342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20114939..20114978 | 17..56 | 100 | -> | Plus |
| 3R | 20115037..20115076 | 57..96 | 100 | -> | Plus |
| 3R | 20115133..20117080 | 97..2046 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:48 Download gff for
BO31342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15940661..15940700 | 17..56 | 100 | -> | Plus |
| arm_3R | 15940759..15940798 | 57..96 | 100 | -> | Plus |
| arm_3R | 15940855..15942802 | 97..2046 | 99 | | Plus |
BO31342.pep Sequence
Translation from 16 to 2062
> BO31342.pep
MADPNLHDNQVIKDGESSESWPAFNRRSPNPSFSSVDQQGNKTKARRQHQ
SRSHSFHSTANSVPESQGPLESRSDLNAKTSSKSERPYISTSNSSWTSES
SSGSPPDSGESSSFSTSSSLSSSLLCAPEPKSINWSNPKSSSNISNETTT
SAGQVGGIPSFSESDDQGSVDSETVSNIRKSTSLIELKDNFNTIIDEDNN
QQLSNEGNILSPGTVSISNFPSSNEVANGLIDEMEQDLLSKQHSTSTPIN
KSNTMEKELLPLQCSSFPPTSSEGNILKPRVNPVPLGPSSNTEYESNGKN
YNIEKRLSQLRYSSDEKESDVLSYASSDSLDLNFDYGDNAKNQNGNGMNG
EVNGDKESQVLDIEEQRKPFEKDVAVKFQTTITTQNCGLLKGPSQFLKMP
YFIPVESKAYVPETFQDRMTKNDLKDEQSREDFINRLKATVRWRENENKT
KESNAKIVRWSDGSETFHVGNEVFDMMHHPVTVNQNHLYVRLGSFYQPQG
LIQNKLTVRPMLDSNFGQSHVQALRNRATNKPQSGCVKVITNMGSNPEHD
HDRRMKEELSKLRQEGREKNRALMKNHPPKRDRHYQGSDHNVAKNAGAFE
EDDGEGADCETSSALEVTNEPMRSEEDTEDHMDDDASWSSPNSQEEGKQS
SSEDDLPIGGAIRKPTRLVYSGSDSDASFLDH
BO31342.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10887-PA | 676 | CG10887-PA | 1..676 | 1..676 | 3523 | 100 | Plus |
| Atu-PA | 725 | CG1433-PA | 75..716 | 34..675 | 383 | 25 | Plus |
