BO31343.complete Sequence
550 bp assembled on 2012-03-26
GenBank Submission: KX797145
> BO31343.complete
GAAGTTATCAGTCGACATGTGGAGATTCCTTCTGATTTGTAGTATTCAGC
TGATTTGCGCATCAGAGCATAGTGGCGAAGGATATGGCGATGGTTACGGA
TACGGCGGAAGCGGAGGCGGCGGCAGTGGATCACTAGGCAGCGGCGGAGG
AGGCGATGGCCACTTTCACCACCACACACCCACCACGTACTCGGAGATCT
CGAAGCATGTGCCGGTGCATGTGATCGAAAAGGTGCCACTGCCCATTCCC
CATCCGGTCGCCGTTCAGGTGCCCAACGTAATTCGGCTTCAAATTCCGGA
ACCCTATGCCGTCCACGTGCCCGTCCAGCAGGAGATCCATGTGCCGGTGT
ATAAAATAGTGCCCGAAATAACCGAAAAGAAGATACCCTACACCGTCGAG
AAGCCATACCCCGTCGAGGTGGAGAAACCTTATCCCGTCGAGGTGATTAA
GCAGATCAAGATCCCGGTGCCTAAGCCCTATCCTGTTCCGTTTACCATCT
ACAAACACGTCCTGCAAAAGGAGCACGGCTGGGCAAGCTTTCTAGACCAT
BO31343.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33299-RC | 519 | CG33299-PC | 1..516 | 17..532 | 2580 | 100 | Plus |
| CG33299-RB | 582 | CG33299-PB | 76..579 | 29..532 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33299-RC | 762 | CG33299-RC | 46..561 | 17..532 | 2580 | 100 | Plus |
| CG33299-RB | 825 | CG33299-RB | 121..624 | 29..532 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9656720..9657223 | 29..532 | 2520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:13:10 has no hits.
BO31343.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:05 Download gff for
BO31343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33299-RC | 46..561 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:23 Download gff for
BO31343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33299-RC | 46..561 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:50 Download gff for
BO31343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33299-RC | 46..561 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:50 Download gff for
BO31343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9656720..9657223 | 29..534 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:23 Download gff for
BO31343.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9656720..9657223 | 29..534 | 99 | | Plus |
BO31343.pep Sequence
Translation from 16 to 550
> BO31343.pep
MWRFLLICSIQLICASEHSGEGYGDGYGYGGSGGGGSGSLGSGGGGDGHF
HHHTPTTYSEISKHVPVHVIEKVPLPIPHPVAVQVPNVIRLQIPEPYAVH
VPVQQEIHVPVYKIVPEITEKKIPYTVEKPYPVEVEKPYPVEVIKQIKIP
VPKPYPVPFTIYKHVLQKEHGWASFLDH
BO31343.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33299-PC | 172 | CG33299-PC | 1..172 | 1..172 | 950 | 100 | Plus |
| CG33299-PB | 193 | CG33299-PB | 26..193 | 5..172 | 923 | 100 | Plus |
| CG7031-PC | 474 | CG7031-PC | 317..473 | 15..172 | 252 | 34.4 | Plus |
| CG7031-PB | 475 | CG7031-PB | 318..474 | 15..172 | 252 | 34.4 | Plus |
| CG7031-PA | 475 | CG7031-PA | 318..474 | 15..172 | 252 | 34.4 | Plus |
