BO31344.complete Sequence
535 bp assembled on 2012-03-26
GenBank Submission: KX798414
> BO31344.complete
GAAGTTATCAGTCGACATGGAGGCGATTTATCAATTGGTCGTAATCTTAG
CTATTATTTTTGGGCATCTGCAGTTCCAGTCCACGGTGTTAGCTGACCCT
GCTTTTCGTCGCCCAAATGCCATCGCGCCCGCCCGCACCTATAGCGGTGT
ATACAACCACTCGACGATTCACAGAGCTGTCGAAAAGTCCAATTTGACTG
CCCCGGCGGTTCACCAACCTGTCCTCCAGGCACCCGGATTTATAATACCA
TATCAGAACCGTTCGTTGGTTCACGCCAATCAGGGATCTCATGGCGTTTT
ACCAGGTAGCGTTCCAGCGCAAGATTCAGGTCCTTCCAGCGTCTGGGTGG
CCAGTAATAATCACCAACCAGGAGTAACTGGCGTTCTTCAACCAAACCCA
TCCCAAGGTAAAATCGTAAATCCACCATTTGTCATTGGCAAAAATAATGG
ATCGTTTTATTCAACCTATAATGCAACAGTCCCTGGCAGGACTTATCCTT
ATGGAAACCTTTCCATTGCAAGCTTTCTAGACCAT
BO31344.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:13:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42846-RA | 504 | CG42846-PA | 1..501 | 17..517 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:13:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42846-RA | 564 | CG42846-RA | 14..516 | 15..517 | 2515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:13:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 231019..231487 | 517..49 | 2345 | 100 | Minus |
3L | 28110227 | 3L | 231556..231591 | 50..15 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:13:14 has no hits.
BO31344.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:06 Download gff for
BO31344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 1..501 | 17..519 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:25 Download gff for
BO31344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 16..516 | 17..519 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:51 Download gff for
BO31344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 16..516 | 17..519 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:51 Download gff for
BO31344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 231016..231485 | 51..519 | 99 | <- | Minus |
3L | 231556..231589 | 17..50 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:25 Download gff for
BO31344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 231016..231485 | 51..519 | 99 | <- | Minus |
arm_3L | 231556..231589 | 17..50 | 100 | | Minus |
BO31344.pep Sequence
Translation from 16 to 535
> BO31344.pep
MEAIYQLVVILAIIFGHLQFQSTVLADPAFRRPNAIAPARTYSGVYNHST
IHRAVEKSNLTAPAVHQPVLQAPGFIIPYQNRSLVHANQGSHGVLPGSVP
AQDSGPSSVWVASNNHQPGVTGVLQPNPSQGKIVNPPFVIGKNNGSFYST
YNATVPGRTYPYGNLSIASFLDH
BO31344.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42846-PA | 167 | CG42846-PA | 1..167 | 1..167 | 879 | 100 | Plus |