BO31345.complete Sequence
472 bp assembled on 2012-03-26
GenBank Submission: KX798385
> BO31345.complete
GAAGTTATCAGTCGACATGTTCGCTCTCGTATCGCTTTTCATCCTGGGTG
TTGGTGCCGCCGCCGCCATCGAGCTGCCCATCTACCACTCACCCGCGGCC
ATTGTGAAGCCACTGCTGAAGACCGTAGAGGTGGAGGCACCTGCCCACTA
CGATTTCGCCTACTCGGTGCACGACGAGCACACCGGCGACATCAAGAGCC
AGACGGAGTCGCGGAAGGGCGATCAGGTCCAGGGTCAGTACACGCTGGTC
GATGCCGATGGCTATCTGCGCACCGTGGACTACACTTCGGATGCCCACAA
CGGCTTCAATGCGGTGGTGCGTCGCGATCCCCTGGGCCAGAAGGTGATCA
AGGCTGCGCCCATTGCCAAGCTCCTGGCTCCCGCACCACTGCCACTGGCC
TATGCGGCACCCAAGCTCCTCGCGCCCGCTAAACTGCCCCTCGGCCTTTA
CCATGCAAGCTTTCTAGACCAT
BO31345.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:13:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr30F-RA | 441 | CG31876-PA | 1..438 | 17..454 | 2190 | 100 | Plus |
| Cpr30B-RA | 462 | CG3818-PA | 127..255 | 179..307 | 240 | 79.1 | Plus |
| Cpr64Ab-RA | 363 | CG15007-PA | 157..295 | 182..320 | 230 | 77.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:13:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr30F-RA | 827 | CG31876-RA | 72..509 | 17..454 | 2190 | 100 | Plus |
| Cpr30B-RA | 711 | CG3818-RA | 196..324 | 179..307 | 240 | 79.1 | Plus |
| Cpr64Ab-RA | 552 | CG15007-RA | 225..363 | 182..320 | 230 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9932590..9933018 | 454..26 | 2145 | 100 | Minus |
| 2L | 23513712 | 2L | 9543143..9543271 | 179..307 | 240 | 79.1 | Plus |
| 3L | 28110227 | 3L | 4211069..4211207 | 320..182 | 230 | 77.7 | Minus |
| 3R | 32079331 | 3R | 6687190..6687298 | 227..335 | 215 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:13:18 has no hits.
BO31345.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:07 Download gff for
BO31345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr30F-RA | 6..438 | 22..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:27 Download gff for
BO31345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr30F-RA | 65..497 | 22..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:53 Download gff for
BO31345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr30F-RA | 77..509 | 22..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:53 Download gff for
BO31345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9932588..9933019 | 22..456 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:27 Download gff for
BO31345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9932588..9933019 | 22..456 | 98 | | Minus |
BO31345.pep Sequence
Translation from 16 to 472
> BO31345.pep
MFALVSLFILGVGAAAAIELPIYHSPAAIVKPLLKTVEVEAPAHYDFAYS
VHDEHTGDIKSQTESRKGDQVQGQYTLVDADGYLRTVDYTSDAHNGFNAV
VRRDPLGQKVIKAAPIAKLLAPAPLPLAYAAPKLLAPAKLPLGLYHASFL
DH
BO31345.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr30F-PA | 146 | CG31876-PA | 1..146 | 1..146 | 746 | 100 | Plus |
| Cpr31A-PA | 340 | CG33302-PA | 103..233 | 12..146 | 289 | 45.2 | Plus |
| Cpr64Aa-PA | 192 | CG15006-PA | 11..158 | 3..138 | 264 | 46.7 | Plus |
| Ccp84Ad-PA | 199 | CG2341-PA | 3..162 | 2..137 | 258 | 42.6 | Plus |
| Cpr30B-PA | 153 | CG3818-PA | 30..141 | 42..145 | 256 | 50 | Plus |
