Clone BO31354 Report

Search the DGRC for BO31354

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG32198-RB
Protein status:BO31354.pep: Imported from assembly
Sequenced Size:442

Clone Sequence Records

BO31354.complete Sequence

442 bp assembled on 2012-03-26

GenBank Submission: KX797274

> BO31354.complete
GAAGTTATCAGTCGACATGTGTTCCAAACTAACTCTTTTCCTGGGGTTAG
TGGCCCTCATTGCTGCTGTCTTTGCTCTTGATGATCCCACATCGCCGACA
TCCCCAACATCTCCAACATCTCCAACTTCGCCGACTTCTCCAACTTCGCC
GACTTCTCCAACTTCTCCCACTTCTCCTACATCACCAACTTCACCAACAA
CGCCAGATGCCTCTACTGCCACCACTGCCGCCCCCTCTACGGCATCCACT
ACCACAGAAAGGACTCGCAGACGCAGGCGCAGGCGCAGGATAATCCGGAT
CCGCAGGTTCAGGGGCGGCAACCGCCGTCGTGGATTCGGTAGACGCAGAT
TCGGTGGTCGCCGGTTCGGTGAGGGAGGTGTCCGTGAAGTCGTGATCCGT
GAGCGCGGATTGGAGCGCCTCCTTGCAAGCTTTCTAGACCAT

BO31354.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:13:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32198-RB 411 CG32198-PB 1..408 17..424 2040 100 Plus
CG15741-RA 408 CG15741-PA 109..161 125..177 175 88.7 Plus
CG15741-RA 408 CG15741-PA 121..167 119..165 175 91.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32198-RB 470 CG32198-RB 15..422 17..424 2040 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:13:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18526990..18527397 17..424 2040 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:13:50 has no hits.

BO31354.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:12 Download gff for BO31354.complete
Subject Subject Range Query Range Percent Splice Strand
CG32198-RB 1..408 17..426 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:44 Download gff for BO31354.complete
Subject Subject Range Query Range Percent Splice Strand
CG32198-RB 15..422 17..426 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:06 Download gff for BO31354.complete
Subject Subject Range Query Range Percent Splice Strand
CG32198-RB 15..422 17..426 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:06 Download gff for BO31354.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18526990..18527397 17..426 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:44 Download gff for BO31354.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18520090..18520497 17..426 99   Plus

BO31354.pep Sequence

Translation from 16 to 442

> BO31354.pep
MCSKLTLFLGLVALIAAVFALDDPTSPTSPTSPTSPTSPTSPTSPTSPTS
PTSPTSPTSPTTPDASTATTAAPSTASTTTERTRRRRRRRRIIRIRRFRG
GNRRRGFGRRRFGGRRFGEGGVREVVIRERGLERLLASFLDH

BO31354.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32198-PB 136 CG32198-PB 1..136 1..136 691 100 Plus
CG12522-PA 137 CG12522-PA 5..137 5..139 200 45 Plus
CG15741-PA 135 CG15741-PA 6..107 12..105 187 42.2 Plus
CG32071-PA 150 CG32071-PA 15..149 5..134 184 44.4 Plus
CG15741-PA 135 CG15741-PA 7..106 7..105 173 43 Plus
nol-PA 130 CG32077-PA 1..120 1..116 172 33.1 Plus