BO31359.complete Sequence
1126 bp assembled on 2012-03-26
GenBank Submission: KX798060
> BO31359.complete
GAAGTTATCAGTCGACATGGATTTCCACCTGCTGATGATTGCACTCGTGC
TTGCACCAGTCTTTACACCTGTCCACTGCCAGGTGGCCTGCAATGCGAGG
AGCGGCCCTGTCCGCCAGAAACGCATCGTTCTCAGCAGCCCGGGAACAGG
TGGGCTGGCCGAGTTGGACACTTGCCAGTACCGCGTGGCGCCGTGGAGCG
GCCAGGTGTGTCAGGTGCGCGTTGATTTCGAGCGTTTGGAGCTGCCGCAG
CCGCAGTTGAATGCCAATTCCGGAGTGCTGGAGTGCGTCGATTTTCTGCA
GATACAGCATTTCCGGCTGTGCGGTCGCAACAGTGGTCAGCACTTGTATA
TACCCATTCGCCGGGGTCAGGAGCTGCAGCTTCTGTTTCGACTGGCCACG
TCCCTCGGCAGGCAGTCCACCTGGCAGCTGACTCTCACCCAACTAGAGTG
TCCCAGGGACTCCGCCAGGGGTGTAGGTACAAGGCAACCCGAGGTGCAAA
CACCCACTGTGCGACCGATTTTGCCCTTTTTGGGTAACTTCCTGCCGCGG
ACCATCTTTGGCGGACAATCTGGAATCGGCTCGGGTTCCGGTCCCGCTGC
CCAGCTTATCCAGACTTTCACATCGCCTTCAAGTGCGGATCTGGAGATGT
TGGCACCTCTGGGCTGTGATCAGTACTACAGGACCACCACTGGCGGAATA
GTGAGCTTCAATTTTGCAGGTGGCGTCTATATGCCCAACATGAAGTACTC
GATTTGTGTCAAGGGAGCGGCAGACAACGAGATAAGCTACAAGATCACGC
ACTTTGAGCTCTCGAAGGCGAACTCCGAGCAGCCAGGACCTGCCTATGAC
ACCGATTGCCGCAGTACAGTGCTGACTCCGTTGCGCGTATCTGACTATGT
GAGCATTCCCGATGCATACATGGTCGGCAGGCCAGAGCTGCAGGCCACTC
ACTACTGTGGCAATGGATTGGCTGGCCAGGAGCTAGTGGCCCGGCCGCCT
TTTGTCCTGCGATTCGCCAGTGATTCGCAGTCCAGTGGATCTGAAACGGG
CTTCCAGCTGACCTACACGGTCCGGCGGTCACAGGATTCCCTGGTGTCCA
CAGATCTGGCAAGCTTTCTAGACCAT
BO31359.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:13:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15153-RA | 1095 | CG15153-PA | 1..1092 | 17..1108 | 5460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:13:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15153-RA | 1317 | CG15153-RA | 15..1110 | 13..1108 | 5465 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:13:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18091469..18092242 | 786..13 | 3855 | 99.9 | Minus |
| 2L | 23513712 | 2L | 18090944..18091267 | 1108..785 | 1620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:13:27 has no hits.
BO31359.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:08 Download gff for
BO31359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15153-RA | 1..1092 | 17..1110 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:31 Download gff for
BO31359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15153-RA | 19..1110 | 17..1110 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:56 Download gff for
BO31359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15153-RA | 19..1110 | 17..1110 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:56 Download gff for
BO31359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18090942..18091265 | 787..1110 | 99 | <- | Minus |
| 2L | 18091469..18092238 | 17..786 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:31 Download gff for
BO31359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18090942..18091265 | 787..1110 | 99 | <- | Minus |
| arm_2L | 18091469..18092238 | 17..786 | 100 | | Minus |
BO31359.pep Sequence
Translation from 16 to 1126
> BO31359.pep
MDFHLLMIALVLAPVFTPVHCQVACNARSGPVRQKRIVLSSPGTGGLAEL
DTCQYRVAPWSGQVCQVRVDFERLELPQPQLNANSGVLECVDFLQIQHFR
LCGRNSGQHLYIPIRRGQELQLLFRLATSLGRQSTWQLTLTQLECPRDSA
RGVGTRQPEVQTPTVRPILPFLGNFLPRTIFGGQSGIGSGSGPAAQLIQT
FTSPSSADLEMLAPLGCDQYYRTTTGGIVSFNFAGGVYMPNMKYSICVKG
AADNEISYKITHFELSKANSEQPGPAYDTDCRSTVLTPLRVSDYVSIPDA
YMVGRPELQATHYCGNGLAGQELVARPPFVLRFASDSQSSGSETGFQLTY
TVRRSQDSLVSTDLASFLDH
BO31359.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15153-PA | 364 | CG15153-PA | 1..364 | 1..364 | 1908 | 100 | Plus |
| CG17047-PB | 392 | CG17047-PB | 96..390 | 33..355 | 424 | 34.4 | Plus |
| CG17047-PA | 392 | CG17047-PA | 96..390 | 33..355 | 424 | 34.4 | Plus |
| CG4734-PA | 325 | CG4734-PA | 10..324 | 10..352 | 230 | 26.5 | Plus |
