Clone BO31362 Report

Search the DGRC for BO31362

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG5044-RB
Protein status:BO31362.pep: Imported from assembly
Sequenced Size:1192

Clone Sequence Records

BO31362.complete Sequence

1192 bp assembled on 2012-03-26

GenBank Submission: KX797837

> BO31362.complete
GAAGTTATCAGTCGACATGCAGGGCCCAATTCAAAGGTTGGTGTACACAT
TTGGTCATCGCACCTGTAGCCAATTGCCGATGATCGGCGGAGCAACGATA
TCCCAAACAAAACCAACAACAATGGCTCTCTCCGTTCGCCAATCCTCCTC
CTCCGTGCTGGCCACGGAGTCCTCTAACAAGGGAATGATTATTCTGAACC
GGCCCAAGGCGCTTAACGCCATCAACTTGGAGATGGTACGCAAGATCTAC
AAGCACCTGAAGAAGTGCGAGAAGTCCAAGTCGCTGGTGATCATCAAGGG
CACAGGTGACAAGGCCTTCTGCGCCGGTGGAGATGTGCGCGCTCTGGTCG
AGGCTGGCCCTACGGATGAGTCGAAGAGCTTCTTCCGGGAGGAGTACAGC
ACGAATGCCCTGATCGGAAACTATAAGATTCCCTACATCGCCATCATTGA
CGGTATTACCATGGGCGGTGGCGTGGGTCTGAGTGTGCATGGCAAGTACC
GGGTGGCCAGCGATCGGACACTGTTCGCCATGCCCGAGACGGCGATTGGC
CTCTTCCCGGATGTGGGTGGATCATACTTCCTGCCTCGACTGCAGGGAAA
GCTGGGCCTCTATCTGGGTCTCACAGGATATCGACTGCGCGGAGCCGATG
TCTATTACTCAGGCATTGCTACGCACTACTGCGAGAGCAGCAAGATCCCT
GATCTGGAGACGGCTCTCCTTAACTGCCCGGATGCGGATGATGTTCCTGA
GCTGCTGCAGAAGTACCATTCCCCGCCAGAAAAGCCCTTCTCGCTGCAGC
CTGTCCTGGAGCAGATCAACAAGAATTTTTCAGCGGACTCGGTGGAGGGG
ATTCTAGAGAATCTGCAGAACGATGGCAGTGAATGGGCCAAGAAGACGCT
TGAGACGCTCTCGAAGATGTCTCCCACCTCGATGAAGGTTACGTTCCGTC
AGTTGGAGCTCGGATCACAGCTGTCGCTGGCTCAGTGTCTTATTATGGAA
TATCGTCTGGCCGTGCGTCATCTGGAGCGAAGTGATTTCAAGGAGGGAGT
GCGCGCCCTACTCATCGACAAGGATCAGAAGCCCCAGTGGCAGCCAACCA
AGCTGGCCGATGTTACTGAGGAACATGTGCAGTGGTTTTTCCGCAAGCTG
CCGGACACCGAGGAACTCAAGCTGGCAAGCTTTCTAGACCAT

BO31362.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG5044-RB 1161 CG5044-PB 1..1158 17..1174 5730 99.7 Plus
CG5044-RA 1158 CG5044-PA 3..1155 22..1174 5705 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG5044-RB 1702 CG5044-RB 90..1247 17..1174 5730 99.7 Plus
CG5044-RA 1699 CG5044-RA 92..1244 22..1174 5705 99.7 Plus
ldlCp-RA 3015 CG6177-RA 2688..2959 1174..903 1330 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15357389..15358274 19..904 4400 99.8 Plus
3R 32079331 3R 15358537..15358808 903..1174 1330 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 04:14:16 has no hits.

BO31362.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:16 Download gff for BO31362.complete
Subject Subject Range Query Range Percent Splice Strand
CG5044-RB 74..1231 17..1176 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:13:58 Download gff for BO31362.complete
Subject Subject Range Query Range Percent Splice Strand
CG5044-RB 90..1247 17..1176 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:18 Download gff for BO31362.complete
Subject Subject Range Query Range Percent Splice Strand
CG5044-RB 90..1247 17..1176 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:18 Download gff for BO31362.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15358539..15358808 905..1176 98   Plus
3R 15357388..15358274 17..904 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:13:58 Download gff for BO31362.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11184261..11184530 905..1176 98   Plus
arm_3R 11183110..11183996 17..904 99 -> Plus

BO31362.pep Sequence

Translation from 16 to 1192

> BO31362.pep
MQGPIQRLVYTFGHRTCSQLPMIGGATISQTKPTTMALSVRQSSSSVLAT
ESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKA
FCAGGDVRALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMG
GGVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQGKLGLYL
GLTGYRLRGADVYYSGIATHYCESSKIPDLETALLNCPDADDVPELLQKY
HSPPEKPFSLQPVLEQINKNFSADSVEGILENLQNDGSEWAKKTLETLSK
MSPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLERSDFKEGVRALLI
DKDQKPQWQPTKLADVTEEHVQWFFRKLPDTEELKLASFLDH

BO31362.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG5044-PB 386 CG5044-PB 1..386 1..386 1991 100 Plus
CG5044-PA 385 CG5044-PA 2..385 3..386 1981 100 Plus
CG6543-PA 295 CG6543-PA 45..215 48..219 205 31.6 Plus
CG6543-PB 295 CG6543-PB 45..215 48..219 205 31.6 Plus
CG8778-PA 299 CG8778-PA 51..225 57..229 174 28.4 Plus