Clone BO31363 Report

Search the DGRC for BO31363

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptSin-RA
Protein status:BO31363.pep: Imported from assembly
Sequenced Size:1492

Clone Sequence Records

BO31363.complete Sequence

1492 bp assembled on 2012-04-06

GenBank Submission: KX795194

> BO31363.complete
GAAGTTATCAGTCGACATGGAAGACGAGGACGATCCCGTCGTGGAGGAGA
TTCCCGTATTCCTGTCGAAGAACCTGAGGGACAGCCTGTATCTCTTTCAA
TACCCCACGAAAACGGAGCTCCCCAACCACGATGACTCCGTGATTGTCAA
TTGTTGTGTAAAACCAATCGCCCAGGAGGTGAAGGTGGACTTCGGCCTGG
ACATTGAGTCGGCCCACTTCGATCGCTTCAAGGGCGAGCAATTTGCGGTG
GCCGCCGACGGAAAGAACACCTATGGAGCAGTTCCACCAAAGGGTCAGGA
GCGACCCACCTACAAACGTGGCATCATGGACAAACAGGCCTTCACAAGCT
CGCGTTCCATAACCGATGTGGCCAAGTACATAGTGGGCATCTTTACGGAT
CGGGAGGTGCATCTGTCGCCACTTACATCCATAGTCCAAATGCGACCCGT
TCTCAGTCACTTCGATAAGGACGACAAGCGCAAGAAGGCGGAACTGAAGG
CTCAAACGGAGGACACGGACGATGACGAGGTGCTGCAGCAGGTCACGGTT
AAATTTGCACGAGGAAATGCCAAAAACAGCGGAAAGGAGCAACGTGTCGG
CACCTACGACAGTTTCGTCCAGCGAATTGCGGATGAGCCGTGGTGCGAGG
CCTACTGGCACTCGAGGGGCACGCCCACCGCCGAACTGGAGCGCCAGAAG
CTCTTTGCCACCAGTCATCACGGCAGTTCCTCTTTGGCTCTCGCTCCTGA
CGAATATCTTCGAAAGCTTCTGCCCTACGACGAGCATGTGCAGACGGTAG
CCCCAGCAGCTGCTTCTGCTGCCGCCCAAGTACTTCCCGTCTACAACAAG
GCCATGCTTAAGTCTATGCCGCTGCTGGAACAGCTTACAGTGCTACTGAG
AGATGCGCGGATGCTCTCGTTCAGCGACGTCATTAGTATTCTCGCGGAGC
ACGTGGATCCGCATGTGGCTGCCGACAAGGTGCTGGCTTTGCTGCCCCAG
GTGGGCATCCTACTGCACGGCAACTGGGTGCCGAAATCCGAGGTGGTCTT
TCCCGAGAAGGTGCTTTCCCATGCGAACGGTGTGTCCGCAGAGCAGATGA
TTCGCGCCAGAGATTATATACTCTTTCGTTTCTCCCGCACGCCCTACCTG
TTCCGAGCTCAGGTAATGGCCGCCACCCAGTTACCTCCTGCGGAAACACT
TGACGTTTTGAAGACTGTGGCCCGGGTGAATAACACAAAACGGTGGGAGC
TGCTACTGCCACCCGACAAGGAGTTCGAGCAAAAGTACCCGGAACTGGTC
AGCCGACAGGAGTACCACTGGACCGCTTCCGAGCAGCACTACAATGAAAT
GGACTGGGCTAGGGAAACCAAACGTGTTCGGAAACGTTCGACGAGGAAGA
GCGAATCCCAGTCACTGACTTCAGCCATGCCGCCGCCCGCAATGAATCAC
TCAACAACTGGCTCCGTGGATGCGGCAAGCTTTCTAGACCAT

BO31363.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:24:32
Subject Length Description Subject Range Query Range Score Percent Strand
Sin-RA 1461 CG10582-PA 1..1458 17..1474 7290 100 Plus
Sin-RC 1458 CG10582-PC 29..1455 48..1474 7135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:24:34
Subject Length Description Subject Range Query Range Score Percent Strand
Sin-RA 1614 CG10582-RA 65..1522 17..1474 7290 100 Plus
Sin-RC 1673 CG10582-RC 155..1581 48..1474 7135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21031979..21033051 48..1120 5365 100 Plus
3L 28110227 3L 21033116..21033469 1121..1474 1770 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:24:32 has no hits.

BO31363.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:46:55 Download gff for BO31363.complete
Subject Subject Range Query Range Percent Splice Strand
Sin-RA 93..1550 17..1476 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:50 Download gff for BO31363.complete
Subject Subject Range Query Range Percent Splice Strand
Sin-RA 65..1522 17..1476 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:28:01 Download gff for BO31363.complete
Subject Subject Range Query Range Percent Splice Strand
Sin-RA 65..1522 17..1476 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:28:01 Download gff for BO31363.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21031889..21031921 17..49 100 -> Plus
3L 21031981..21033051 50..1120 100 -> Plus
3L 21033116..21033469 1121..1476 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:50 Download gff for BO31363.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21024989..21025021 17..49 100 -> Plus
arm_3L 21025081..21026151 50..1120 100 -> Plus
arm_3L 21026216..21026569 1121..1476 99   Plus

BO31363.pep Sequence

Translation from 16 to 1492

> BO31363.pep
MEDEDDPVVEEIPVFLSKNLRDSLYLFQYPTKTELPNHDDSVIVNCCVKP
IAQEVKVDFGLDIESAHFDRFKGEQFAVAADGKNTYGAVPPKGQERPTYK
RGIMDKQAFTSSRSITDVAKYIVGIFTDREVHLSPLTSIVQMRPVLSHFD
KDDKRKKAELKAQTEDTDDDEVLQQVTVKFARGNAKNSGKEQRVGTYDSF
VQRIADEPWCEAYWHSRGTPTAELERQKLFATSHHGSSSLALAPDEYLRK
LLPYDEHVQTVAPAAASAAAQVLPVYNKAMLKSMPLLEQLTVLLRDARML
SFSDVISILAEHVDPHVAADKVLALLPQVGILLHGNWVPKSEVVFPEKVL
SHANGVSAEQMIRARDYILFRFSRTPYLFRAQVMAATQLPPAETLDVLKT
VARVNNTKRWELLLPPDKEFEQKYPELVSRQEYHWTASEQHYNEMDWARE
TKRVRKRSTRKSESQSLTSAMPPPAMNHSTTGSVDAASFLDH

BO31363.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
Sin-PA 486 CG10582-PA 1..486 1..486 2514 100 Plus
Sin-PC 485 CG10582-PC 10..485 11..486 2458 99.8 Plus