Clone BO31365 Report

Search the DGRC for BO31365

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG42568-RA
Protein status:BO31365.pep: Imported from assembly
Sequenced Size:364

Clone Sequence Records

BO31365.complete Sequence

364 bp assembled on 2012-03-26

GenBank Submission: KX799032

> BO31365.complete
GAAGTTATCAGTCGACATGAAGTCAACTATTCAAATCGGCACCCTGTGCA
TCGTGGTGCTCGTGATCTGCTGCCTGGACTTCTCCAGTTCACAGAACTCC
TCCTCCACTTCCACCAGTCCCACCTACAGCTCGTCCAGCACGCCCAAGAA
AGTGTACCTGTCCAACTTGACGTACTCGATTGTGAGGAAGATCCGTGTGG
GCACCACCACCGCCAGCAGCACCAGCCGTAGTTCCAGGACCAGGAGCAAC
CGGAAACTGAACGCCAAGAAGACCCAGGCCAAACGGAGCCAGGCCAAGCG
CTCCGGCAAGAACAGGAAGTCGAACTCCCGCCGTGCCAGCAGGGGCGCAA
GCTTTCTAGACCAT

BO31365.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG42568-RB 333 CG42568-PB 1..330 17..346 1650 100 Plus
CG42568-RA 333 CG42568-PA 1..330 17..346 1650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
DnaJ-60-RC 1472 CG42567-RC 1025..1356 15..346 1660 100 Plus
CG42568-RB 1472 CG42568-RB 1025..1356 15..346 1660 100 Plus
CG42568-RA 1468 CG42568-RA 1021..1352 15..346 1660 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24157784..24158115 346..15 1660 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:14:20 has no hits.

BO31365.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:17 Download gff for BO31365.complete
Subject Subject Range Query Range Percent Splice Strand
CG42568-RB 1011..1340 17..348 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:01 Download gff for BO31365.complete
Subject Subject Range Query Range Percent Splice Strand
CG42568-RA 1023..1352 17..348 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:20 Download gff for BO31365.complete
Subject Subject Range Query Range Percent Splice Strand
CG42568-RA 1023..1352 17..348 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:20 Download gff for BO31365.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24157782..24158113 17..348 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:01 Download gff for BO31365.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20045305..20045636 17..348 99   Minus

BO31365.pep Sequence

Translation from 16 to 364

> BO31365.pep
MKSTIQIGTLCIVVLVICCLDFSSSQNSSSTSTSPTYSSSSTPKKVYLSN
LTYSIVRKIRVGTTTASSTSRSSRTRSNRKLNAKKTQAKRSQAKRSGKNR
KSNSRRASRGASFLDH

BO31365.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG42568-PB 110 CG42568-PB 1..110 1..110 535 100 Plus
CG42568-PA 110 CG42568-PA 1..110 1..110 535 100 Plus
CG34273-PA 128 CG34273-PA 40..124 23..105 165 49.4 Plus