BO31366.complete Sequence
556 bp assembled on 2012-03-26
GenBank Submission: KX797047
> BO31366.complete
GAAGTTATCAGTCGACATGTTTAAGAATTCCGTTGCCTTGACGTGCGAAT
ACTCAACCATGTATTATAACTCAATTTATAATACTTCCAACATGTTCGAC
ATGAAACACTCCGAAAGTCAAGTTCAGCAACAAATATATAACACAAGTCA
CCTAGGTTATGTGCCAACTTCGAATACTCGGATTGTTAAGAAACGTAATA
CAGCTAACAAAAAGGAGAGAAGGCGAACCCAAAGTATAAACAATGCGTTT
TCCTATCTGCGAGAAAAGATTCCCAACGTTCCTACAGATACTAAATTATC
AAAGATTAAAACATTGAAGTTGGCCATATTGTACATAAACTATTTAGTTA
ATGTTCTTGATGGAGATCTGGATCCAAAAGGCGGATTTCGAGCCGAACTT
AAGCCGGTCAGTCGAAAGATCTGTAGCGAAAAGAAGCACTGTTTGAAATC
AGAGATTCAAAATGTTCCATTGTCGACCAAGGGCCGCACGGGTTGGCCAC
AAGATGTTTGGGCATCGGAACTTATTCCAGAACATAATGCAAGCTTTCTA
GACCAT
BO31366.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:14:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hand-RA | 525 | CG18144-PA | 1..522 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:14:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hand-RA | 713 | CG18144-RA | 87..608 | 17..538 | 2610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:14:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10294863..10295059 | 304..108 | 985 | 100 | Minus |
2L | 23513712 | 2L | 10294474..10294631 | 460..303 | 790 | 100 | Minus |
2L | 23513712 | 2L | 10295209..10295299 | 107..17 | 455 | 100 | Minus |
2L | 23513712 | 2L | 10292784..10292866 | 538..456 | 400 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:14:24 has no hits.
BO31366.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:17 Download gff for
BO31366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hand-RA | 7..522 | 23..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:02 Download gff for
BO31366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hand-RA | 93..608 | 23..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:21 Download gff for
BO31366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hand-RA | 93..608 | 23..540 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:21 Download gff for
BO31366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10292782..10292861 | 461..540 | 97 | <- | Minus |
2L | 10294474..10294629 | 305..460 | 100 | <- | Minus |
2L | 10294863..10295059 | 108..304 | 100 | <- | Minus |
2L | 10295209..10295293 | 23..107 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:02 Download gff for
BO31366.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10292782..10292861 | 461..540 | 97 | <- | Minus |
arm_2L | 10294474..10294629 | 305..460 | 100 | <- | Minus |
arm_2L | 10294863..10295059 | 108..304 | 100 | <- | Minus |
arm_2L | 10295209..10295293 | 23..107 | 100 | | Minus |
BO31366.pep Sequence
Translation from 16 to 556
> BO31366.pep
MFKNSVALTCEYSTMYYNSIYNTSNMFDMKHSESQVQQQIYNTSHLGYVP
TSNTRIVKKRNTANKKERRRTQSINNAFSYLREKIPNVPTDTKLSKIKTL
KLAILYINYLVNVLDGDLDPKGGFRAELKPVSRKICSEKKHCLKSEIQNV
PLSTKGRTGWPQDVWASELIPEHNASFLDH
BO31366.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hand-PA | 174 | CG18144-PA | 1..174 | 1..174 | 914 | 100 | Plus |
Fer1-PA | 251 | CG33323-PA | 77..140 | 54..117 | 152 | 48.4 | Plus |
Fer1-PB | 256 | CG33323-PB | 82..145 | 54..117 | 152 | 48.4 | Plus |
HLH54F-PA | 242 | CG5005-PA | 32..88 | 59..115 | 150 | 47.4 | Plus |
Fer2-PE | 273 | CG5952-PE | 148..210 | 59..120 | 145 | 52.4 | Plus |