Clone BO31367 Report

Search the DGRC for BO31367

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:67
Vector:pDNR-Dual
Associated Gene/Transcriptrobl62A-RA
Protein status:BO31367.pep: Imported from assembly
Sequenced Size:346

Clone Sequence Records

BO31367.complete Sequence

346 bp assembled on 2012-03-26

GenBank Submission: KX797344

> BO31367.complete
GAAGTTATCAGTCGACATGTCGAAAATTTATCTGAAGGCCATGGAGGATG
TGGTGCAGCGAAACACGGACAACACAAACCGGATTACGGAGCAGGCGCAG
GGATTCGTGGTGTCGGAAAATGCCGGGGACAGTCTGCTGCACACTTCATT
CGATTTGACCACGGCCCAGTCGATTGTGAAGCACCTGCACGCCAGTTTCC
TGAAATTGGCCCAGAGCTGCGTCCGTGATCTGGATACCGATGATAAGCTG
TGCTTTCTGCGCGTGAAAACCCGCAAGCACGAATTCCTGGTTAGTCCAGA
GGAAGCCTTCACTGTGACCGTGGTATTGGCAAGCTTTCTAGACCAT

BO31367.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
robl62A-RB 315 CG1014-PB 1..312 17..328 1560 100 Plus
robl62A-RA 315 CG1014-PA 1..312 17..328 1560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:14:29
Subject Length Description Subject Range Query Range Score Percent Strand
robl62A-RB 591 CG1014-RB 103..414 17..328 1560 100 Plus
robl62A-RA 751 CG1014-RA 103..414 17..328 1560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1477721..1478032 17..328 1560 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:14:27 has no hits.

BO31367.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:18 Download gff for BO31367.complete
Subject Subject Range Query Range Percent Splice Strand
robl62A-RA 103..414 17..330 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:04 Download gff for BO31367.complete
Subject Subject Range Query Range Percent Splice Strand
robl62A-RA 103..414 17..330 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:22 Download gff for BO31367.complete
Subject Subject Range Query Range Percent Splice Strand
robl62A-RA 103..414 17..330 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:22 Download gff for BO31367.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1477721..1478032 17..330 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:04 Download gff for BO31367.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1477721..1478032 17..330 99   Plus

BO31367.pep Sequence

Translation from 16 to 346

> BO31367.pep
MSKIYLKAMEDVVQRNTDNTNRITEQAQGFVVSENAGDSLLHTSFDLTTA
QSIVKHLHASFLKLAQSCVRDLDTDDKLCFLRVKTRKHEFLVSPEEAFTV
TVVLASFLDH

BO31367.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
robl62A-PB 104 CG1014-PB 1..104 1..104 523 100 Plus
robl62A-PA 104 CG1014-PA 1..104 1..104 523 100 Plus
CG31275-PA 101 CG31275-PA 3..100 7..103 243 49 Plus