BO31379.complete Sequence
766 bp assembled on 2012-03-26
GenBank Submission: KX798151
> BO31379.complete
GAAGTTATCAGTCGACATGCGCGACCAATTCATCAGCCTGGCCCTGATTC
TGTGCGTCCTGCACAGCGCCTGCGGCTTGTACTTCCACATATCGCAGACG
GAGCGCAAGTGCTTCATCGAGGAGGTTCCCGACGAGACAACTGTGATTGT
TAACTACAAGGTAGAGCTGTATGATCCGCGCTCTAATGGATTCATGCCCT
CGTCGCCCGGAATCGGCATGCATGTGGAAGTACGCGACAGCGACGACAAG
ATTGTGCTGTCCCGCGTGTACAGCTCACAGGGCCGCATCTCGTTCACCTC
GCACACTCCTGGCGAGCACGTCATCTGCATGTTCTCGAACAGCACCGCGT
GGTTCAGTGGTGCCCAGCTGCGTGTTCACCTGGACATCCAGGTGGGAGAG
CACGCTATCGACTACGCCCATGTGGCGCAGAAGGAGAAACTGACTGAGCT
GCAGCTGCGCATCCGCCAGCTACTTGACCAGGTGGAGCAGATCACCAAGG
AGCAGAACTACCAGCGATACCGCGAGGAGCGGTTCCGTCACACCAGCGAG
AGCACCAACTCCCGCGTGCTCTGGTGGTCGCTGGCCCAGACCGTCGTCTT
GGTTTGCATGGGCTTCTGGCATCTATTTAACCTGTTCCACACTTGTGTGT
ACATTAACGAGCAGTGTTTGTGTGTGTGCTGTCTTTATATAAAGAAAATA
TCTGCCCTTGGCCTTATCAATGATAAGATTAATGGCTTGCCAGACCCGGC
AAGCTTTCTAGACCAT
BO31379.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:14:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p24-2-RB | 735 | CG33105-PB | 1..732 | 17..748 | 3660 | 100 | Plus |
| p24-2-RA | 735 | CG33105-PA | 1..732 | 17..748 | 3660 | 100 | Plus |
| eca-RA | 651 | CG33104-PA | 1..605 | 17..621 | 3010 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:14:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Unc-115b-RE | 3535 | CG31332-RE | 77..808 | 17..748 | 3660 | 100 | Plus |
| p24-2-RB | 3535 | CG33105-RB | 77..808 | 17..748 | 3660 | 100 | Plus |
| p24-2-RA | 830 | CG33105-RA | 96..827 | 17..748 | 3660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:14:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9691906..9692505 | 748..149 | 3000 | 100 | Minus |
| 3R | 32079331 | 3R | 9684713..9685185 | 621..149 | 2365 | 100 | Minus |
| 3R | 32079331 | 3R | 9692567..9692699 | 149..17 | 665 | 100 | Minus |
| 3R | 32079331 | 3R | 9685247..9685379 | 149..17 | 650 | 99.2 | Minus |
| 3R | 32079331 | 3R | 9699792..9699920 | 748..620 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:14:55 has no hits.
BO31379.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:23 Download gff for
BO31379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| unc-115-RE | 77..808 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:20 Download gff for
BO31379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Unc-115b-RE | 77..808 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:35 Download gff for
BO31379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p24-2-RA | 96..827 | 17..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:35 Download gff for
BO31379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9691903..9692504 | 150..750 | 99 | <- | Minus |
| 3R | 9692567..9692699 | 17..149 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:20 Download gff for
BO31379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5517625..5518226 | 150..750 | 99 | <- | Minus |
| arm_3R | 5518289..5518421 | 17..149 | 100 | | Minus |
BO31379.pep Sequence
Translation from 16 to 766
> BO31379.pep
MRDQFISLALILCVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVE
LYDPRSNGFMPSSPGIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGE
HVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYAHVAQKEKLTELQLRIR
QLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCMGF
WHLFNLFHTCVYINEQCLCVCCLYIKKISALGLINDKINGLPDPASFLDH
BO31379.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p24-2-PB | 244 | CG33105-PB | 1..244 | 1..244 | 1300 | 100 | Plus |
| p24-2-PA | 244 | CG33105-PA | 1..244 | 1..244 | 1300 | 100 | Plus |
| eca-PA | 216 | CG33104-PA | 1..206 | 1..206 | 1058 | 97.6 | Plus |
| bai-PA | 206 | CG11785-PA | 3..195 | 2..206 | 179 | 26.3 | Plus |
| CHOp24-PB | 208 | CG3564-PB | 16..198 | 10..206 | 144 | 23.4 | Plus |
