Clone BO31384 Report

Search the DGRC for BO31384

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG7798-RA
Protein status:BO31384.pep: Imported from assembly
Sequenced Size:478

Clone Sequence Records

BO31384.complete Sequence

478 bp assembled on 2012-03-26

GenBank Submission: KX798426

> BO31384.complete
GAAGTTATCAGTCGACATGTGGCCCATTTGGCTGCTGGTGCTCTTAACGC
TATCACTGGCCACTGGCCGCCAGGTGGGCAGATGCAGTTTGGCCCGGCAG
CTGTATCGATACGGAATGGCTTACAACGAGCTACCCGATTGGCTGTGCCT
CGTGGAGGGCGAGAGCTCGTTCAACACAAAAGCCATCAATCCCTCGAACG
TTGATGGATCCGTGGACTGGGGTCTCTTCCAGATCAACGATCGTTACTGG
TGCAAGCCGGCGGATGGTCGTCCATCCAACGATCTGTGTCGCTTGCCCTG
CCGCCTGCTGTTGAGCGACGATATCCGGTATTCCATTGCCTGTGCGAAGT
ACATCAGGAAACAGCAAGGATTCTCCGCCTGGGTGGCTTGGAACAATCGA
TGTCAGGGTGTCAAGCCCAATGTGAATCACTGCTTCCGGCGGCGACACAG
AAATTCGGGTGCAAGCTTTCTAGACCAT

BO31384.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:14:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7798-RA 447 CG7798-PA 1..444 17..460 2220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:14:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7798-RA 516 CG7798-RA 1..444 17..460 2220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:14:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16222184..16222627 460..17 2220 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:14:35 has no hits.

BO31384.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:19 Download gff for BO31384.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..444 17..462 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:09 Download gff for BO31384.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..444 17..462 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:27 Download gff for BO31384.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..444 17..462 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:27 Download gff for BO31384.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16222181..16222627 17..462 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:09 Download gff for BO31384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12109686..12110132 17..462 99   Minus

BO31384.pep Sequence

Translation from 16 to 478

> BO31384.pep
MWPIWLLVLLTLSLATGRQVGRCSLARQLYRYGMAYNELPDWLCLVEGES
SFNTKAINPSNVDGSVDWGLFQINDRYWCKPADGRPSNDLCRLPCRLLLS
DDIRYSIACAKYIRKQQGFSAWVAWNNRCQGVKPNVNHCFRRRHRNSGAS
FLDH

BO31384.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG7798-PA 148 CG7798-PA 1..148 1..148 828 100 Plus
LysP-PA 141 CG9116-PA 12..141 10..140 349 47.3 Plus
LysB-PB 140 CG1179-PB 5..140 7..140 337 46 Plus
LysB-PA 140 CG1179-PA 5..140 7..140 337 46 Plus
LysD-PA 140 CG9118-PA 5..140 4..140 334 45.3 Plus