Clone BO31386 Report

Search the DGRC for BO31386

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG43124-RA
Protein status:BO31386.pep: Imported from assembly
Sequenced Size:769

Clone Sequence Records

BO31386.complete Sequence

769 bp assembled on 2012-03-26

GenBank Submission: KX796370

> BO31386.complete
GAAGTTATCAGTCGACATGAACACAGCAAGATGGATAGTACTGTGTATCG
TTTTGATGTTTTACCAGGGATCTGCCCAGACTCTGGAGGAGGATTGCGTA
GACCACATGGAGCGGATTAATGGATCAAGCTATGCTCCCTGGCTGGCTGA
AATTCTATCGGATTCTAAAGTAATTTGCGCTGGAGCACTCATAAATAATC
TTTATGTTCTAACAGCTGCGAGTTGTTTTAAAGAGAATGAAAAACTAACT
GTTCGCTTGGGCAGTGGCTATTTTGATAAAAGCTACGAAAATTTCCGAGT
AACAAAGGCTTACTTTTGGATGACACATTTCCCGGCCAACAATACGAATA
ATTTGTGTATCTTTCGGTTGCAAACGGAAGTGGAATTTAAGACCCACATT
CGACCGATGTGTATCACAAAAAGTCCTAAAAGCCTTGGATTGGCGACCAC
TTTTGAAATTATCAATGAAAAGCCCAAAATGTGGTACTTTTGTAAAAACA
TAAAAGGTTTATTCTGTAAATATGTTTTCGGAGAAAATGAAGAAAAATGG
CAGTCCAAACCCACTGGAAGTCCTTGGACTGAAACAATCTCAAACGGTCC
TTTCAAGGGACTTGTACGATATGGAATCCTGAGCTATCGTGATAACAAAA
CCTATGATGAGGTTTATATAAATGTTATGTCTCATATTAACTGGATAGCT
CAAATCTCGTTAGAGATTGATATAAGTACTCCAGTCAAGAAAAAAGAATA
TGCAAGCTTTCTAGACCAT

BO31386.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG43124-RA 738 CG43124-PA 1..735 17..751 3675 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG43124-RA 784 CG43124-RA 30..764 17..751 3675 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28263891..28264395 751..247 2525 100 Minus
3R 32079331 3R 28264557..28264744 204..17 925 99.5 Minus
3R 32079331 3R 28264455..28264500 246..201 230 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:15:03 has no hits.

BO31386.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:24 Download gff for BO31386.complete
Subject Subject Range Query Range Percent Splice Strand
CG43124-RA 30..749 17..736 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:25 Download gff for BO31386.complete
Subject Subject Range Query Range Percent Splice Strand
CG43124-RA 30..749 17..736 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:38 Download gff for BO31386.complete
Subject Subject Range Query Range Percent Splice Strand
CG43124-RA 30..749 17..736 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:38 Download gff for BO31386.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28264561..28264744 17..200 100   Minus
3R 28263906..28264395 247..736 100 <- Minus
3R 28264455..28264500 201..246 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:25 Download gff for BO31386.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24090283..24090466 17..200 100   Minus
arm_3R 24089628..24090117 247..736 100 <- Minus
arm_3R 24090177..24090222 201..246 100 <- Minus

BO31386.pep Sequence

Translation from 16 to 769

> BO31386.pep
MNTARWIVLCIVLMFYQGSAQTLEEDCVDHMERINGSSYAPWLAEILSDS
KVICAGALINNLYVLTAASCFKENEKLTVRLGSGYFDKSYENFRVTKAYF
WMTHFPANNTNNLCIFRLQTEVEFKTHIRPMCITKSPKSLGLATTFEIIN
EKPKMWYFCKNIKGLFCKYVFGENEEKWQSKPTGSPWTETISNGPFKGLV
RYGILSYRDNKTYDEVYINVMSHINWIAQISLEIDISTPVKKKEYASFLD
H

BO31386.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG43124-PA 245 CG43124-PA 1..245 1..245 1324 100 Plus
CG43125-PA 258 CG43125-PA 1..249 1..237 298 33.1 Plus
CG34436-PA 270 CG34436-PA 1..270 1..246 214 26.7 Plus
CG30286-PB 277 CG30286-PB 3..268 6..227 196 27.3 Plus
CG33465-PC 488 CG33465-PC 10..261 11..227 194 28.6 Plus