BO31387.complete Sequence
1921 bp assembled on 2012-04-06
GenBank Submission: KX796025
> BO31387.complete
GAAGTTATCAGTCGACATGAATGTCCTCGTGATCCTGGTTCTATGCCTTA
TGGCAATCGCATGTCTGGCGGACGTTTCCCATGTGAAACACCACAAGCAC
CAGCGGCATCATCACTCCAGGGATCACGAAGATGACGATGAGGAGTCCCA
TTACCTACCTCCCCACGAGGAAAAGGAGGTGGAGCAACCTTTTTACAAGA
AGGAGAAGCACACCAGTGAAAAGGTGGTTTACCACAAGGTAGAGGAGCAC
GAGGAGCCCAAATACTACAAGGAGCATCAACATGAAGAGCCCAAAAAGCA
GCGAGTGGATCACTACCATCACTATGACAAGAAGCCAGAAGTAAAGACCC
AGCACATTCACTACAAGCATAGCAAGCCCCATGTCCGTACGGATTACAAT
CAGGACTTGTTCACCCCAGCTGCTACCCAAGTGGTTTATCGCCGCCGTCG
TCCTAGTCGAATTCTATACGCCAGTGCCCCCAACTCGGTGTTCCACACCC
ACACGCAGATCAACGTGCAGTCCCAGGATTCGGAATTGAATTCCCTTACT
CGCCCAGATCGTGCAGCAGGAGCACAGGATCCTGCTGGGGCTCAAGCACC
GACTGGAGCCCAGGCACCAGGATTTCGACCCAACTGCCAGTTTGTTGGAC
CTGGAAACGTACCACCTGGCTGTGGACCCTCTGATCCCATAGGTGCTCAG
CTACCAGCCAGTGCTTTGGCTCCCACTGGTGCTAATCTTCCGGCCAATCA
ACCTGTTGCCGGCGGACAATTGGCTGTTCTGGGTAACGGTCAGCGACCTC
CACGTCCAGGTGGCTATGGAGGTGGATATGGCAACCGACTCAACTTTTTT
GTTGATCCTTCGCTGGGCGCTCAGCTGGGAGCCATAGGTAATGCTGGAGC
TGGAAATCAACAGGCTGCCGGAGGAGGTCAGCTTGCGGGAGGAGCTCAAC
TTGGAGGGAGCCAAGGATTCGACCCTTCCTTTGGTGCCCAAGCAGCTGCC
GGAGGACCATTTAACACTGGTTTTGGAGCTGGTCAAAGACCTCAAAGACC
TGCGCAAAACCAATATGATCCCAACCTTCAGCTAGGTGGCCCTTTTGACC
CCTCCGTGGGTGCTCAATTGGGCGCAGGTCAGGGTGTTTCTAACCAAAGA
CCAAGTGGACAGGGAGCATTTGATCCTTCTACAGGTGCTCAATTGGGCGC
AGGTGAGGGTGTTTCTAACCAAAGACCAAGTGGACAGGGAGCATTTGATC
CTTCTACGGGTGCTCAATTGGGTGCAGGTCAGGGCTTTAACCAGAGACCA
AGTGCACAGGGAGCATTTGATCCTTCGACAGGTGCCCAACTTGGAGCTGG
ACAAGGCGTGCCTAACCAGCGACCCAATGCAGCTGGACCAGGAGCTTTTG
ATCCCAATCAGCGACAGTCCGACCCCTCCATTGGAGCCCAATTGGCAGCG
GGACAAGTACCACGCCTCAACAACCGACGACAGCGCAATCGATCCAACTA
CCAGGGTCTCAATGTGCTGAATGGAAACGTTTTCGGACAACCCCATCTCC
AGGGACCCACAAATGCGCTGGGAAATCAACAGGACACCAACATCATAGAC
GGCAACTTCTACAGCGATCCTCATCATGGACACCAGCGGGCTTTGGTATC
GGTTAATCCTAATCAGCGTTCAGTCCTTATACCCGATGACGATGATGCGG
ACGATGATGGGCAGCTAGGATTTCTGGGCTTTGCGGCTAGTAACAAGCAG
TCCTCTTATGTGGTTGCTCCCAAACAACTGCGATCTCATAGGCGCAGTTC
AAAGCGAAACAATGTGGATCTTAAAACATCTGCTTCGGAGTACGACACTG
ACTATCGTGAGGATGGCTATCACTACCAGAAGCCCAAACAGTCATTCGAG
TTTGCAAGCTTTCTAGACCAT
BO31387.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:26:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11349-RB | 1890 | CG11349-PB | 1..1887 | 17..1903 | 9435 | 100 | Plus |
CG11349-RB | 1890 | CG11349-PB | 1093..1251 | 1184..1339 | 550 | 91.2 | Plus |
CG11349-RB | 1890 | CG11349-PB | 1168..1323 | 1109..1267 | 550 | 91.2 | Plus |
CG11349-RB | 1890 | CG11349-PB | 1092..1176 | 1258..1339 | 240 | 88.2 | Plus |
CG11349-RB | 1890 | CG11349-PB | 1242..1323 | 1108..1192 | 240 | 88.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11349-RB | 1970 | CG11349-RB | 10..1896 | 17..1903 | 9435 | 100 | Plus |
CG11349-RB | 1970 | CG11349-RB | 1102..1260 | 1184..1339 | 550 | 91.2 | Plus |
CG11349-RB | 1970 | CG11349-RB | 1177..1332 | 1109..1267 | 550 | 91.2 | Plus |
CG11349-RB | 1970 | CG11349-RB | 1101..1185 | 1258..1339 | 240 | 88.2 | Plus |
CG11349-RB | 1970 | CG11349-RB | 1251..1332 | 1108..1192 | 240 | 88.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:26:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4473137..4475021 | 19..1903 | 9425 | 100 | Plus |
3L | 28110227 | 3L | 4474227..4474385 | 1184..1339 | 550 | 91.2 | Plus |
3L | 28110227 | 3L | 4474302..4474457 | 1109..1267 | 550 | 91.2 | Plus |
3L | 28110227 | 3L | 4474226..4474310 | 1258..1339 | 240 | 88.2 | Plus |
3L | 28110227 | 3L | 4474376..4474457 | 1108..1192 | 240 | 88.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:26:23 has no hits.
BO31387.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:47:00 Download gff for
BO31387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11349-RB | 10..1896 | 17..1905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:02 Download gff for
BO31387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11349-RB | 10..1896 | 17..1905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:28:48 Download gff for
BO31387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11349-RB | 10..1896 | 17..1905 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:28:48 Download gff for
BO31387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4473136..4475021 | 17..1905 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:02 Download gff for
BO31387.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4473136..4475021 | 17..1905 | 99 | | Plus |
BO31387.pep Sequence
Translation from 16 to 1921
> BO31387.pep
MNVLVILVLCLMAIACLADVSHVKHHKHQRHHHSRDHEDDDEESHYLPPH
EEKEVEQPFYKKEKHTSEKVVYHKVEEHEEPKYYKEHQHEEPKKQRVDHY
HHYDKKPEVKTQHIHYKHSKPHVRTDYNQDLFTPAATQVVYRRRRPSRIL
YASAPNSVFHTHTQINVQSQDSELNSLTRPDRAAGAQDPAGAQAPTGAQA
PGFRPNCQFVGPGNVPPGCGPSDPIGAQLPASALAPTGANLPANQPVAGG
QLAVLGNGQRPPRPGGYGGGYGNRLNFFVDPSLGAQLGAIGNAGAGNQQA
AGGGQLAGGAQLGGSQGFDPSFGAQAAAGGPFNTGFGAGQRPQRPAQNQY
DPNLQLGGPFDPSVGAQLGAGQGVSNQRPSGQGAFDPSTGAQLGAGEGVS
NQRPSGQGAFDPSTGAQLGAGQGFNQRPSAQGAFDPSTGAQLGAGQGVPN
QRPNAAGPGAFDPNQRQSDPSIGAQLAAGQVPRLNNRRQRNRSNYQGLNV
LNGNVFGQPHLQGPTNALGNQQDTNIIDGNFYSDPHHGHQRALVSVNPNQ
RSVLIPDDDDADDDGQLGFLGFAASNKQSSYVVAPKQLRSHRRSSKRNNV
DLKTSASEYDTDYREDGYHYQKPKQSFEFASFLDH
BO31387.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11349-PB | 629 | CG11349-PB | 1..629 | 1..629 | 3391 | 100 | Plus |
prc-PB | 1713 | CG5700-PB | 214..499 | 185..480 | 264 | 36.7 | Plus |
prc-PB | 1713 | CG5700-PB | 333..641 | 185..480 | 262 | 34.3 | Plus |
prc-PB | 1713 | CG5700-PB | 452..839 | 185..503 | 256 | 30.5 | Plus |
prc-PB | 1713 | CG5700-PB | 123..414 | 204..480 | 236 | 34 | Plus |
prc-PB | 1713 | CG5700-PB | 873..1192 | 185..521 | 213 | 31.3 | Plus |
CG10555-PB | 926 | CG10555-PB | 499..816 | 180..482 | 179 | 27.2 | Plus |
CG10555-PA | 926 | CG10555-PA | 499..816 | 180..482 | 179 | 27.2 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 203..430 | 213..460 | 169 | 29.7 | Plus |