Clone BO31387 Report

Search the DGRC for BO31387

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:87
Vector:pDNR-Dual
Associated Gene/TranscriptCG11349-RB
Protein status:BO31387.pep: Imported from assembly
Sequenced Size:1921

Clone Sequence Records

BO31387.complete Sequence

1921 bp assembled on 2012-04-06

GenBank Submission: KX796025

> BO31387.complete
GAAGTTATCAGTCGACATGAATGTCCTCGTGATCCTGGTTCTATGCCTTA
TGGCAATCGCATGTCTGGCGGACGTTTCCCATGTGAAACACCACAAGCAC
CAGCGGCATCATCACTCCAGGGATCACGAAGATGACGATGAGGAGTCCCA
TTACCTACCTCCCCACGAGGAAAAGGAGGTGGAGCAACCTTTTTACAAGA
AGGAGAAGCACACCAGTGAAAAGGTGGTTTACCACAAGGTAGAGGAGCAC
GAGGAGCCCAAATACTACAAGGAGCATCAACATGAAGAGCCCAAAAAGCA
GCGAGTGGATCACTACCATCACTATGACAAGAAGCCAGAAGTAAAGACCC
AGCACATTCACTACAAGCATAGCAAGCCCCATGTCCGTACGGATTACAAT
CAGGACTTGTTCACCCCAGCTGCTACCCAAGTGGTTTATCGCCGCCGTCG
TCCTAGTCGAATTCTATACGCCAGTGCCCCCAACTCGGTGTTCCACACCC
ACACGCAGATCAACGTGCAGTCCCAGGATTCGGAATTGAATTCCCTTACT
CGCCCAGATCGTGCAGCAGGAGCACAGGATCCTGCTGGGGCTCAAGCACC
GACTGGAGCCCAGGCACCAGGATTTCGACCCAACTGCCAGTTTGTTGGAC
CTGGAAACGTACCACCTGGCTGTGGACCCTCTGATCCCATAGGTGCTCAG
CTACCAGCCAGTGCTTTGGCTCCCACTGGTGCTAATCTTCCGGCCAATCA
ACCTGTTGCCGGCGGACAATTGGCTGTTCTGGGTAACGGTCAGCGACCTC
CACGTCCAGGTGGCTATGGAGGTGGATATGGCAACCGACTCAACTTTTTT
GTTGATCCTTCGCTGGGCGCTCAGCTGGGAGCCATAGGTAATGCTGGAGC
TGGAAATCAACAGGCTGCCGGAGGAGGTCAGCTTGCGGGAGGAGCTCAAC
TTGGAGGGAGCCAAGGATTCGACCCTTCCTTTGGTGCCCAAGCAGCTGCC
GGAGGACCATTTAACACTGGTTTTGGAGCTGGTCAAAGACCTCAAAGACC
TGCGCAAAACCAATATGATCCCAACCTTCAGCTAGGTGGCCCTTTTGACC
CCTCCGTGGGTGCTCAATTGGGCGCAGGTCAGGGTGTTTCTAACCAAAGA
CCAAGTGGACAGGGAGCATTTGATCCTTCTACAGGTGCTCAATTGGGCGC
AGGTGAGGGTGTTTCTAACCAAAGACCAAGTGGACAGGGAGCATTTGATC
CTTCTACGGGTGCTCAATTGGGTGCAGGTCAGGGCTTTAACCAGAGACCA
AGTGCACAGGGAGCATTTGATCCTTCGACAGGTGCCCAACTTGGAGCTGG
ACAAGGCGTGCCTAACCAGCGACCCAATGCAGCTGGACCAGGAGCTTTTG
ATCCCAATCAGCGACAGTCCGACCCCTCCATTGGAGCCCAATTGGCAGCG
GGACAAGTACCACGCCTCAACAACCGACGACAGCGCAATCGATCCAACTA
CCAGGGTCTCAATGTGCTGAATGGAAACGTTTTCGGACAACCCCATCTCC
AGGGACCCACAAATGCGCTGGGAAATCAACAGGACACCAACATCATAGAC
GGCAACTTCTACAGCGATCCTCATCATGGACACCAGCGGGCTTTGGTATC
GGTTAATCCTAATCAGCGTTCAGTCCTTATACCCGATGACGATGATGCGG
ACGATGATGGGCAGCTAGGATTTCTGGGCTTTGCGGCTAGTAACAAGCAG
TCCTCTTATGTGGTTGCTCCCAAACAACTGCGATCTCATAGGCGCAGTTC
AAAGCGAAACAATGTGGATCTTAAAACATCTGCTTCGGAGTACGACACTG
ACTATCGTGAGGATGGCTATCACTACCAGAAGCCCAAACAGTCATTCGAG
TTTGCAAGCTTTCTAGACCAT

BO31387.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG11349-RB 1890 CG11349-PB 1..1887 17..1903 9435 100 Plus
CG11349-RB 1890 CG11349-PB 1093..1251 1184..1339 550 91.2 Plus
CG11349-RB 1890 CG11349-PB 1168..1323 1109..1267 550 91.2 Plus
CG11349-RB 1890 CG11349-PB 1092..1176 1258..1339 240 88.2 Plus
CG11349-RB 1890 CG11349-PB 1242..1323 1108..1192 240 88.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:26:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG11349-RB 1970 CG11349-RB 10..1896 17..1903 9435 100 Plus
CG11349-RB 1970 CG11349-RB 1102..1260 1184..1339 550 91.2 Plus
CG11349-RB 1970 CG11349-RB 1177..1332 1109..1267 550 91.2 Plus
CG11349-RB 1970 CG11349-RB 1101..1185 1258..1339 240 88.2 Plus
CG11349-RB 1970 CG11349-RB 1251..1332 1108..1192 240 88.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4473137..4475021 19..1903 9425 100 Plus
3L 28110227 3L 4474227..4474385 1184..1339 550 91.2 Plus
3L 28110227 3L 4474302..4474457 1109..1267 550 91.2 Plus
3L 28110227 3L 4474226..4474310 1258..1339 240 88.2 Plus
3L 28110227 3L 4474376..4474457 1108..1192 240 88.2 Plus
Blast to na_te.dros performed on 2014-11-28 04:26:23 has no hits.

BO31387.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:47:00 Download gff for BO31387.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 10..1896 17..1905 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:02 Download gff for BO31387.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 10..1896 17..1905 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:28:48 Download gff for BO31387.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 10..1896 17..1905 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:28:48 Download gff for BO31387.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4473136..4475021 17..1905 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:02 Download gff for BO31387.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4473136..4475021 17..1905 99   Plus

BO31387.pep Sequence

Translation from 16 to 1921

> BO31387.pep
MNVLVILVLCLMAIACLADVSHVKHHKHQRHHHSRDHEDDDEESHYLPPH
EEKEVEQPFYKKEKHTSEKVVYHKVEEHEEPKYYKEHQHEEPKKQRVDHY
HHYDKKPEVKTQHIHYKHSKPHVRTDYNQDLFTPAATQVVYRRRRPSRIL
YASAPNSVFHTHTQINVQSQDSELNSLTRPDRAAGAQDPAGAQAPTGAQA
PGFRPNCQFVGPGNVPPGCGPSDPIGAQLPASALAPTGANLPANQPVAGG
QLAVLGNGQRPPRPGGYGGGYGNRLNFFVDPSLGAQLGAIGNAGAGNQQA
AGGGQLAGGAQLGGSQGFDPSFGAQAAAGGPFNTGFGAGQRPQRPAQNQY
DPNLQLGGPFDPSVGAQLGAGQGVSNQRPSGQGAFDPSTGAQLGAGEGVS
NQRPSGQGAFDPSTGAQLGAGQGFNQRPSAQGAFDPSTGAQLGAGQGVPN
QRPNAAGPGAFDPNQRQSDPSIGAQLAAGQVPRLNNRRQRNRSNYQGLNV
LNGNVFGQPHLQGPTNALGNQQDTNIIDGNFYSDPHHGHQRALVSVNPNQ
RSVLIPDDDDADDDGQLGFLGFAASNKQSSYVVAPKQLRSHRRSSKRNNV
DLKTSASEYDTDYREDGYHYQKPKQSFEFASFLDH

BO31387.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11349-PB 629 CG11349-PB 1..629 1..629 3391 100 Plus
prc-PB 1713 CG5700-PB 214..499 185..480 264 36.7 Plus
prc-PB 1713 CG5700-PB 333..641 185..480 262 34.3 Plus
prc-PB 1713 CG5700-PB 452..839 185..503 256 30.5 Plus
prc-PB 1713 CG5700-PB 123..414 204..480 236 34 Plus
prc-PB 1713 CG5700-PB 873..1192 185..521 213 31.3 Plus
CG10555-PB 926 CG10555-PB 499..816 180..482 179 27.2 Plus
CG10555-PA 926 CG10555-PA 499..816 180..482 179 27.2 Plus
Cpr47Ef-PD 601 CG13214-PD 203..430 213..460 169 29.7 Plus