BO31392.complete Sequence
853 bp assembled on 2012-03-26
GenBank Submission: KX800040
> BO31392.complete
GAAGTTATCAGTCGACATGGGCGGAAGTGCCAGAGGCGTGGGGCGGAGGG
GCGTGGTCCTGGAGCAGGATGTACGCACAAGGTCGTCGCAGGGGGAGCGA
AAGAGGGGGCTCGCTGGCAAACAGCAGCACAACAATGCCAAGCTTCCGCT
TAGGATGCGCTCGAACGGAAGTTATTTTGGCCGCCTGAACGTGAGCGCGC
TGCTCATCTACTTGTGGTGCTATCTGCTACTGGTTATGGCAGCATCTGGC
GGCAGCAACCACGTGGTAAATGGCCTCAAATGCTATTGCAATCCGAAGGA
GTGCGACGTGATCCGCTCACCCGACTGCCCCGGAAAAGGACTTATGCTGT
GGGATCCATGCAAATGTTGCCGCATATGCGCCAAAACTTTGGGCGAATCC
TGCGGCGGTCCGGGCGGATTTTCCGGTCAATGTGAGCCGCCCCTGCAGTG
TGTGACCAAGCTGCCCATTAGCAGCGGATTGGGCGTGTGCATGGATTTGC
AGCACCTGACCGCCCTGACCTACAGTCAGCACGATAATTGTTCCGACAGC
GATTCGATTGTTTTGGAGCCGGGCTGCGAGATCACCAACAAACGCTGCCA
GTGCTGGCCAACTATGCGCACCTGTCTCAGCGAACTGACCAGCGATGGGG
GATCCCCCGACGACTCTCGCTGGCACTTCAAGAACCTAGAGGACTGCCAG
TTGAATCTACAAAATCTAATAAAACTCGAACAGGAATTCGATGAAGACTA
CAAAATCTCACCGAGCAAATTCACATACAAAAAACTACGCAGAAAGCGAA
AATCTTTAAAGAAACGAATCATCATCTTGAAGGATGCAAGCTTTCTAGAC
CAT
BO31392.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:15:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cmpy-RD | 822 | CG13253-PD | 1..819 | 17..835 | 4095 | 100 | Plus |
| cmpy-RC | 822 | CG13253-PC | 1..819 | 17..835 | 4095 | 100 | Plus |
| cmpy-RB | 351 | CG13253-PB | 1..347 | 17..363 | 1735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:15:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cmpy-RD | 1638 | CG13253-RD | 373..1191 | 17..835 | 4095 | 100 | Plus |
| cmpy-RC | 1622 | CG13253-RC | 357..1175 | 17..835 | 4095 | 100 | Plus |
| cmpy-RB | 2737 | CG13253-RB | 1815..2290 | 360..835 | 2365 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20716799..20717145 | 363..17 | 1735 | 100 | Minus |
| 3L | 28110227 | 3L | 20713680..20713878 | 692..494 | 995 | 100 | Minus |
| 3L | 28110227 | 3L | 20715553..20715687 | 494..360 | 660 | 99.3 | Minus |
| 3L | 28110227 | 3L | 20713484..20713613 | 819..690 | 650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:15:19 has no hits.
BO31392.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:26 Download gff for
BO31392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13253-RC | 355..1173 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:34 Download gff for
BO31392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cmpy-RC | 357..1175 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:47 Download gff for
BO31392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cmpy-RC | 357..1175 | 17..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:47 Download gff for
BO31392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20713484..20713611 | 692..819 | 100 | <- | Minus |
| 3L | 20713681..20713877 | 495..691 | 100 | <- | Minus |
| 3L | 20715553..20715683 | 364..494 | 100 | <- | Minus |
| 3L | 20716799..20717145 | 17..363 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:34 Download gff for
BO31392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20706584..20706711 | 692..819 | 100 | <- | Minus |
| arm_3L | 20706781..20706977 | 495..691 | 100 | <- | Minus |
| arm_3L | 20708653..20708783 | 364..494 | 100 | <- | Minus |
| arm_3L | 20709899..20710245 | 17..363 | 100 | | Minus |
BO31392.pep Sequence
Translation from 16 to 853
> BO31392.pep
MGGSARGVGRRGVVLEQDVRTRSSQGERKRGLAGKQQHNNAKLPLRMRSN
GSYFGRLNVSALLIYLWCYLLLVMAASGGSNHVVNGLKCYCNPKECDVIR
SPDCPGKGLMLWDPCKCCRICAKTLGESCGGPGGFSGQCEPPLQCVTKLP
ISSGLGVCMDLQHLTALTYSQHDNCSDSDSIVLEPGCEITNKRCQCWPTM
RTCLSELTSDGGSPDDSRWHFKNLEDCQLNLQNLIKLEQEFDEDYKISPS
KFTYKKLRRKRKSLKKRIIILKDASFLDH
BO31392.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cmpy-PD | 273 | CG13253-PD | 1..273 | 1..273 | 1491 | 100 | Plus |
| cmpy-PC | 273 | CG13253-PC | 1..273 | 1..273 | 1491 | 100 | Plus |
| cmpy-PB | 116 | CG13253-PB | 1..116 | 1..116 | 627 | 100 | Plus |
