Clone BO31393 Report

Search the DGRC for BO31393

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptCG40298-RA
Protein status:BO31393.pep: Imported from assembly
Sequenced Size:1111

Clone Sequence Records

BO31393.complete Sequence

1111 bp assembled on 2012-03-26

GenBank Submission: KX796737

> BO31393.complete
GAAGTTATCAGTCGACATGAATTGGCGTAGTTTTATTGTTACTTTAATAA
ACTGCATAGTCTGGTCAATACAAGTTATTCAATTAAATGGTACTGGAATT
AAAAACCTAGGAAGAACAAGAGACTCTTTTAGAGCGGTACAAGTACCCCA
ACAGTTTTATGATGCTATCGAACAGTCAGATTTCAGTAAACATAGTTTAC
AAAATAAGTTAGAGCATTTCCTTGAAAAACTTCAAAAAAACTTGACCATA
TCGGCAGTATTGAGTGACTCCGAAGATATTGTCACAAGTGAAAGAAACTA
TGTTTACAAGATGCGAGAACTATCAACCTTCTTTTATGAAGCTTCTTTTT
CTTTCGAACAATTTTCTTCTGATATCCAAACTTTTTATGAAACATCAAAA
AATGCAAGCTACGCACTTTTGTTTAAACTACGCCAAGTCCCAACAGGTCA
ACCAACTCTAGTAAAGGCTTTACTCACAAACTATTTTGCGGAAATAGAAT
TCTTTCATGTGTTGTTTTCAGAAATTATCGATGATGCTATGGAATATAGT
ACTAAATCCCTAAAATGGATTCAAGAACTATTTGTTTATTATGCTGATAC
TCAAAATAATATTCTAGAAAATTGGAAATTGAAGACAAATCTTGAATGCT
GCAAACTTTATGTCAACTTCTTACAGGATCAGTCCTCTCAGATTTTTAAA
TGCGCTACTGTGGATAATCTTAATATAATATACGATGTGTATTCCGTAAC
GAAGCTTAACATAAAATATATACTAAGGCAACTTGAGTTTCGCATCCAAC
GATTATTCAATTGTTTATTGTATAACAGCCCTAACATACAATGTAAGCTT
CTTAAAAGAGCAGAGAAAGATCTTAAAACCTTATTTAGAAATCTCTCCGA
GCTAGACATGTTCATCGATATAAAAACTAAAAAAGGCAAAGCAGCCGCAT
TAAGATTTCGTCGAGGAAACACATGGAACAGCAATCAAATTAAATTGGAA
CCGAACCAGAACTACTGCCTTCCAATTGGCTTTCCAAATACTCAAATGTC
AACAGATCTAAAAGAATGCTTTTACTTTTTAGATAATATAGTGGCAAGCT
TTCTAGACCAT

BO31393.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:15:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG40298-RA 1080 CG40298-PA 1..1077 17..1093 5385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:15:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG40298-RA 1161 CG40298-RA 39..1115 17..1093 5385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:15:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 23726867..23727943 17..1093 5385 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:15:23 has no hits.

BO31393.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:27 Download gff for BO31393.complete
Subject Subject Range Query Range Percent Splice Strand
CG40298-RA 1..1077 17..1095 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:36 Download gff for BO31393.complete
Subject Subject Range Query Range Percent Splice Strand
CG40298-RA 39..1115 17..1095 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:48 Download gff for BO31393.complete
Subject Subject Range Query Range Percent Splice Strand
CG40298-RA 39..1115 17..1095 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:48 Download gff for BO31393.complete
Subject Subject Range Query Range Percent Splice Strand
3L 23726867..23727943 17..1095 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:36 Download gff for BO31393.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 23719967..23721043 17..1095 99   Plus

BO31393.pep Sequence

Translation from 16 to 1111

> BO31393.pep
MNWRSFIVTLINCIVWSIQVIQLNGTGIKNLGRTRDSFRAVQVPQQFYDA
IEQSDFSKHSLQNKLEHFLEKLQKNLTISAVLSDSEDIVTSERNYVYKMR
ELSTFFYEASFSFEQFSSDIQTFYETSKNASYALLFKLRQVPTGQPTLVK
ALLTNYFAEIEFFHVLFSEIIDDAMEYSTKSLKWIQELFVYYADTQNNIL
ENWKLKTNLECCKLYVNFLQDQSSQIFKCATVDNLNIIYDVYSVTKLNIK
YILRQLEFRIQRLFNCLLYNSPNIQCKLLKRAEKDLKTLFRNLSELDMFI
DIKTKKGKAAALRFRRGNTWNSNQIKLEPNQNYCLPIGFPNTQMSTDLKE
CFYFLDNIVASFLDH

BO31393.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG40298-PA 359 CG40298-PA 1..359 1..359 1865 100 Plus