Clone BO31396 Report

Search the DGRC for BO31396

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:313
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG13058-RA
Protein status:BO31396.pep: Imported from assembly
Sequenced Size:478

Clone Sequence Records

BO31396.complete Sequence

478 bp assembled on 2012-03-26

GenBank Submission: KX797281

> BO31396.complete
GAAGTTATCAGTCGACATGCACATCACGGTTGTTTGCCTCGTATTCACCT
GGGGCCTGAGCCACAGTCACGCAGCCACGACAATCCTGCATGGCAACGGA
CAGGTGGCCAGTGCCATTTCCCACCAGAGCTTCAGCAGATTATCCTCAGC
AGAGCCACTAACCCTGCAGTCCCGAAAGCAAACACATCAGCTGCTCGTTC
CCTCTGCCAGGATTGTTAATCATCACCAGGCGGCAGTGGAACGACAGCAG
GTGGAGAGGTTCTTTCAGGCGGCAACGGCGGAGGCGGAGGAGGTGCCTGT
CATCTCTGGACAGACACCCGCCCATCTCACCTACGCTGCCCATCCAGTGG
TGCACCAGATGCTGCCAAGGATTAAGCCAGTGCGAAACATTAGCTACGCC
TCCCTGATCCCAGGACCTCGCAGCCTGAACACTCATACGAATCGGAATTT
GTCACCCGTTGCAAGCTTTCTAGACCAT

BO31396.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13058-RA 447 CG13058-PA 1..444 17..460 2220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:11:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13058-RA 606 CG13058-RA 27..471 16..460 2225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16328967..16329399 28..460 2165 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:11:27 has no hits.

BO31396.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:13:47 Download gff for BO31396.complete
Subject Subject Range Query Range Percent Splice Strand
CG13058-RA 30..473 17..462 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:35 Download gff for BO31396.complete
Subject Subject Range Query Range Percent Splice Strand
CG13058-RA 28..471 17..462 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:22:01 Download gff for BO31396.complete
Subject Subject Range Query Range Percent Splice Strand
CG13058-RA 28..471 17..462 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:22:01 Download gff for BO31396.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16328960..16329399 17..462 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:35 Download gff for BO31396.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16322060..16322499 17..462 98   Plus

BO31396.pep Sequence

Translation from 16 to 478

> BO31396.pep
MHITVVCLVFTWGLSHSHAATTILHGNGQVASAISHQSFSRLSSAEPLTL
QSRKQTHQLLVPSARIVNHHQAAVERQQVERFFQAATAEAEEVPVISGQT
PAHLTYAAHPVVHQMLPRIKPVRNISYASLIPGPRSLNTHTNRNLSPVAS
FLDH

BO31396.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13058-PA 148 CG13058-PA 1..148 1..148 759 100 Plus