BO31409.complete Sequence
361 bp assembled on 2012-04-24
GenBank Submission: KX795427
> BO31409.complete
GAAGTTATCAGTCGACATGGCCGAGCTACTTTTTCCACAACTGGAGCGTC
CTTTGCCCTCGCTGCCATCGCTGCACTACACCCTGTTTGCCTACAGGGAG
GAGTTGCGACGCCGCGATGCCCCGTTCATGAAGATGTCCACCATCAAGCT
GCATCTCACGGACAACCTCATCCTGCAGACGATCAAGAACATCCGGCAGT
ATGACACCATCGAGATTATGAATCTCAACCAGGAGATAAACTTCAAGCGG
CGGCTGACCAAACAAATGAGGAAGGTGCGCAAACTGGAGAAGCTCGGCTT
GCACATCGATCCCCGGAAACTCAACGAGGACGGCAAATGGCACGCAAGCT
TTCTAGACCAT
BO31409.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:17:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
halo-RB | 330 | CG7428-PB | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:17:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
halo-RB | 616 | CG7428-RB | 88..414 | 17..343 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:17:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1517735..1518061 | 343..17 | 1635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:17:19 has no hits.
BO31409.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:02:03 Download gff for
BO31409.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
halo-RA | 124..450 | 17..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:05 Download gff for
BO31409.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
halo-RB | 88..414 | 17..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:14:46 Download gff for
BO31409.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
halo-RB | 88..414 | 17..345 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:14:46 Download gff for
BO31409.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1517732..1518061 | 17..345 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:05 Download gff for
BO31409.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1517732..1518061 | 17..345 | 99 | | Minus |
BO31409.pep Sequence
Translation from 16 to 361
> BO31409.pep
MAELLFPQLERPLPSLPSLHYTLFAYREELRRRDAPFMKMSTIKLHLTDN
LILQTIKNIRQYDTIEIMNLNQEINFKRRLTKQMRKVRKLEKLGLHIDPR
KLNEDGKWHASFLDH
BO31409.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
halo-PB | 109 | CG7428-PB | 1..109 | 1..109 | 565 | 100 | Plus |
CG13711-PA | 127 | CG13711-PA | 37..115 | 17..95 | 165 | 32.9 | Plus |
CG13713-PA | 99 | CG13713-PA | 9..81 | 17..89 | 143 | 37 | Plus |
CG13716-PA | 117 | CG13716-PA | 24..94 | 14..84 | 135 | 40.8 | Plus |