Clone BO31412 Report

Search the DGRC for BO31412

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:314
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptU26-RA
Protein status:BO31412.pep: Imported from assembly
Sequenced Size:3070

Clone Sequence Records

BO31412.complete Sequence

3070 bp assembled on 2012-04-06

GenBank Submission: KX795389

> BO31412.complete
GAAGTTATCAGTCGACATGATTCCATCAGATATGGACCTAATTGAATCAA
CCGCGGAGCAGCCGGACAAACTCTACAACATCAACAGAATCCGAGCGTTT
AAAGATGTTCCCTTCCTGATAAGGCGCACGGAGTCCAAGGACACGATCGT
GTCATACGCCGATGCTGCAGATGAGATTCAAGTTTTGATGAATTTTCTGC
GAAAGAACGGGGTCCCAGATGAGGCAGGAATTGCTCTACGAGTCACGGAG
CACACGCCGGCCTCTTCTCTTATGATTTTGGCGATCCTCAACAACAAGTG
CCACTTTTTTCCCACGGATAAGATGATGCTGTCACAGGATCTATACTCAC
AGATGAGCACGGCCGGAGTGGACTACCTCGTGGCCAACAAACATTTAACC
GTTGCACCCTTGTACTTCACATTTCTGGGGAGCATCTTGGTGTTTAAGGA
GGACTGTAGGCTATACAGGGTAAAGTTGAAATCCGCTGATGAGACTGTAC
AATCCAAAAAGCCGTTACCAGCCAATATGTGCTACACAATCTCCACGACG
GGCACTACGGGTAAGCCAAAGCTCATACATGTGCCCTATGAATGCATAGC
GCCCAACATAGTGGGGCTCAGCCAAAAGTTAAACGTCTCCATGGCCGACA
TCATTTACCTTGGCACACCAATTACCTTCGATCCCTTCGTGGTGGAGTTC
TTCCTAGCTCTTCAAAATGGTGCTACTTTACTGACCAGTCGTCACTCCAT
GAGGGACTCGCCAAGCAAGGTGCTAAGTGCCCTCTTCCCCGACAACCTGG
CCACACCGGGAATCACTGTTCTGCAGATGACTCCTTCGCTGTTTCGGCAA
TTTGGTGCATCTTCCATCAAAGATCGAGTGCTCAGCGGGTCCAGTTCATT
GAGAGTACTGCTCCTTGGTGGCGAACCATTTCCCAGCAATGTCGAGCTTG
TTACTTGGATGCATCCAAGTGTCCTGATGCAGAAGCACATATGCAACATA
TATGGAATCACGGAAATATCCTGTTGGAGCCTACTGCACATCGTTCAGTC
ATTACAATCTCCTGTGCCTTTGGGCACGCCTATCGAAGAGGACACGGTTC
TGCGGATTGAATCCGAAGACAATGAAACCTCACAGCAAGGAGAGCTGTTT
CTGGGTAGTGTCAAGCGGCGTTGCTATATCCCAGAAGTTGATGACCAGGC
GAATGCTTCACAAGACGATTCAGGTATTTGTTTCAGGGCGACAGGAGATT
TGGTAACACGACAGCAGGATGGCACATTGTTCTATAGTGAGAGATCGAAC
GATGTGGTAAAGCGAGCTGGTAATCGCATTAGCTTGGGTTTAATCACCAG
AAAAATTCAAAAATGTCTGCCTAGCTCGGAACTGACTACTTGCCTATGGC
TCGAAGATTTGCAGAAACTCATTTGCTGCATTCGAACCCTAGAGTCGAAG
ACTAGAGTTCAGCAGCGGGTCCAAACCTTTGATATACTTTCCAAGGTATC
GATTGCCGAGCAGCCAGATAGATTTGTCTATCTGCAACACTTTCCCTGCA
ACGTACACGGCAAGCTAGACAAGCAACAGCTTCTTAAAATGTGCATTCCC
CTTGCACAACCAGCTCAGCAGATATTAAAGAGCTATCTACACGATAGGCT
AGAATGTGTGGAAGAGCCTGATGATAGCGCTTCGAAAAAGCAGCGACTTG
ATGACGCCGCTCCCTGTGGCTATGATTTGAGTTTTCGCCAGGCGGGTGGC
ACATCATTCCATGCCATCACCATTTGCCGAGAGATAGGTTTACAAATGTG
CATCGATGATGAGCAACGCCACTTGTTCGAAATGCTACTGGATGAGAACA
TTCCGTTGCGCACAGTGCTAAGATTCTTGGACACAGCCAAGTTGGTGGCC
AACAATATTAAGCGAAAGAATGTTGAGACAGCGGTAGTTGTCTCAGCCTG
CCAAAGTGGCTTGATTATTAAACGTATCGAACAGCCGGTCCTCAAGCTTC
AGATCTACTGGAAGGTCAACTTCGAGAAGTGCATAGACTCCCCAGTGACC
GAATACGAGGGACGCTTCATTTGCGTGGGCGCACATTCGAAAATCCTCCG
GACGCTTAATCCCCAGACGGGCAGCGAATACAGTGTAGTGAAACTTCCCG
AACGTATCGAGTGTAAGGTGACGTTCCTCACCGAGCAGCTTGCCATGGTG
GGCTGCTACGATGGATGTCTCTACGGTTTCAATCCCCAAACCGGTAACAT
TGTATTTCGCGTTGGAATTGGTGGCTTAATTAAGTCGCAGCCCATGCTAA
CCGCCGATGGTCGCCGAATCATAGTATGCAGCTATGCCGATGACTACAAT
GTCTATTGCTTGTCAGCCGAGCGGCAGGAGGTGCTGTGGTGCCTAAGGAT
CGGTGAAAAACCGATCTTTGCGAGTCCTTTGGAGCTGCCGAGGGAACAGT
CGCTGATAGTCTGCACTTTGGACGGCAGCTACTCACGTGTGGCCATTACC
GATGGCTCAGTGGAGTGGACGCAGAAATTTAGAGAACCAGTATTCTCCAC
ACCTGTTCTTTTGGAATCCGTATCCAATATTTTTCTAAGCGCGGAAGTGG
CTGGGCGAGTCCATGCCTGTCATGTGGGCAATGGCAAAATTCTGGCTACC
TTCAGCACAGAAGGAAACATTTTCTCTTCGCTAGTGGTCAAGACCCCACC
GACTTTTATGGGACATTCCTTTGCCATTTTTGGTTGCATAGACCAACATT
TGTATTGCCTGCGATGCAAAACCGGACCGGGTGGCAAATCTGTTGAGCTT
GAGCTGCACTGGAAGGTCGATGTGGGTGCACCCATATATGCCACGCCAAC
TTTGCTAACAGTGCAGCCGAACGGTCTTTTGGTTTGGTGCGCCGCCACCG
ATGGACGCGTCATGCTGATAAACTTTAGAAATGGCGAGATTCAGTGGTCG
GATAAACTACCCGGTCAAGTCTTTTCCAGTGCATGCTTTATTGAGGACCT
GCGTCGTGTTTTCGTGGGATGCCGAGACAATTTCCTTTACTGTCTGGGCA
TCGCAAGCTTTCTAGACCAT

BO31412.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:29:10
Subject Length Description Subject Range Query Range Score Percent Strand
U26-RC 3039 CG13401-PC 1..3036 17..3052 15180 100 Plus
U26-RA 3039 CG13401-PA 1..3036 17..3052 15180 100 Plus
U26-RD 972 CG13401-PD 1..972 17..977 4660 98.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:29:12
Subject Length Description Subject Range Query Range Score Percent Strand
U26-RC 3353 CG13401-RC 153..3188 17..3052 15180 100 Plus
U26-RA 3422 CG13401-RA 153..3188 17..3052 15180 100 Plus
U26-RD 3433 CG13401-RD 153..3199 17..3052 15035 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:29:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8446565..8447869 2641..1337 6525 100 Minus
2L 23513712 2L 8447918..8448355 1339..902 2190 100 Minus
2L 23513712 2L 8446095..8446505 3052..2642 2055 100 Minus
2L 23513712 2L 8448759..8449097 621..283 1695 100 Minus
2L 23513712 2L 8448425..8448708 903..620 1420 100 Minus
2L 23513712 2L 8449158..8449424 283..17 1335 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:29:09 has no hits.

BO31412.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 13:47:08 Download gff for BO31412.complete
Subject Subject Range Query Range Percent Splice Strand
U26-RA 148..3183 17..3054 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:28 Download gff for BO31412.complete
Subject Subject Range Query Range Percent Splice Strand
U26-RA 153..3188 17..3054 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:58 Download gff for BO31412.complete
Subject Subject Range Query Range Percent Splice Strand
U26-RA 153..3188 17..3054 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:58 Download gff for BO31412.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8446093..8446505 2642..3054 99 <- Minus
2L 8446565..8447868 1338..2641 100 <- Minus
2L 8447920..8448353 904..1337 100 <- Minus
2L 8448425..8448706 622..903 100 <- Minus
2L 8448759..8449097 283..621 100 <- Minus
2L 8449159..8449424 17..282 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:28 Download gff for BO31412.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8446093..8446505 2642..3054 99 <- Minus
arm_2L 8446565..8447868 1338..2641 100 <- Minus
arm_2L 8447920..8448353 904..1337 100 <- Minus
arm_2L 8448425..8448706 622..903 100 <- Minus
arm_2L 8448759..8449097 283..621 100 <- Minus
arm_2L 8449159..8449424 17..282 100   Minus

BO31412.pep Sequence

Translation from 16 to 3070

> BO31412.pep
MIPSDMDLIESTAEQPDKLYNINRIRAFKDVPFLIRRTESKDTIVSYADA
ADEIQVLMNFLRKNGVPDEAGIALRVTEHTPASSLMILAILNNKCHFFPT
DKMMLSQDLYSQMSTAGVDYLVANKHLTVAPLYFTFLGSILVFKEDCRLY
RVKLKSADETVQSKKPLPANMCYTISTTGTTGKPKLIHVPYECIAPNIVG
LSQKLNVSMADIIYLGTPITFDPFVVEFFLALQNGATLLTSRHSMRDSPS
KVLSALFPDNLATPGITVLQMTPSLFRQFGASSIKDRVLSGSSSLRVLLL
GGEPFPSNVELVTWMHPSVLMQKHICNIYGITEISCWSLLHIVQSLQSPV
PLGTPIEEDTVLRIESEDNETSQQGELFLGSVKRRCYIPEVDDQANASQD
DSGICFRATGDLVTRQQDGTLFYSERSNDVVKRAGNRISLGLITRKIQKC
LPSSELTTCLWLEDLQKLICCIRTLESKTRVQQRVQTFDILSKVSIAEQP
DRFVYLQHFPCNVHGKLDKQQLLKMCIPLAQPAQQILKSYLHDRLECVEE
PDDSASKKQRLDDAAPCGYDLSFRQAGGTSFHAITICREIGLQMCIDDEQ
RHLFEMLLDENIPLRTVLRFLDTAKLVANNIKRKNVETAVVVSACQSGLI
IKRIEQPVLKLQIYWKVNFEKCIDSPVTEYEGRFICVGAHSKILRTLNPQ
TGSEYSVVKLPERIECKVTFLTEQLAMVGCYDGCLYGFNPQTGNIVFRVG
IGGLIKSQPMLTADGRRIIVCSYADDYNVYCLSAERQEVLWCLRIGEKPI
FASPLELPREQSLIVCTLDGSYSRVAITDGSVEWTQKFREPVFSTPVLLE
SVSNIFLSAEVAGRVHACHVGNGKILATFSTEGNIFSSLVVKTPPTFMGH
SFAIFGCIDQHLYCLRCKTGPGGKSVELELHWKVDVGAPIYATPTLLTVQ
PNGLLVWCAATDGRVMLINFRNGEIQWSDKLPGQVFSSACFIEDLRRVFV
GCRDNFLYCLGIASFLDH

BO31412.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
U26-PC 1012 CG13401-PC 1..1012 1..1012 5274 100 Plus
U26-PA 1012 CG13401-PA 1..1012 1..1012 5274 100 Plus
U26-PD 323 CG13401-PD 1..299 1..299 1506 99.3 Plus