Clone BO31437 Report

Search the DGRC for BO31437

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:314
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCpr49Af-RA
Protein status:BO31437.pep: Imported from assembly
Sequenced Size:412

Clone Sequence Records

BO31437.complete Sequence

412 bp assembled on 2012-03-26

GenBank Submission: KX798989

> BO31437.complete
GAAGTTATCAGTCGACATGAAGTACCTAATGTTAATTGCCCTTTTTGTGG
TCGCTGCTTCGGCGACGGACAACGATGATCCGATTTCCCAGGAATCCAAT
GTGGAGTACAATGGCAAATACCATTATCATTATGAGCTCAAAGATGGCTC
GAAGGCCACTCAGGATGGAGTCTTGAAGTCCGTGAATGCCGATCACAACG
GGGAGTCGGTCAATGGAAAGTACTCCTTCGTCGCCGACGATGGAAAGACC
TATGTTGTGTCCTACACGGCGGACGAGAACGGATACCTTGCGGTGGGTGA
CCACCTGCCCACACCGCCACCCACGCCGGTGTCCGTTCTGAAGGCTCTGG
AGTACATCCGCCTGCATCCGTACAAGACGCCCGAGCAGAAGCAAGCAAGC
TTTCTAGACCAT

BO31437.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Af-RB 381 CG8510-PB 1..378 17..394 1890 100 Plus
Cpr49Af-RA 381 CG8510-PA 1..378 17..394 1890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:15:37
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Af-RB 1056 CG8510-RB 73..451 16..394 1895 100 Plus
Cpr49Af-RA 533 CG8510-RA 73..451 16..394 1895 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12406176..12406440 130..394 1325 100 Plus
2R 25286936 2R 12406004..12406117 16..129 570 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:15:35 has no hits.

BO31437.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:29 Download gff for BO31437.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr49Af-RA 1..378 17..396 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:40 Download gff for BO31437.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr49Af-RA 74..451 17..396 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:54 Download gff for BO31437.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr49Af-RA 74..451 17..396 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:54 Download gff for BO31437.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12406005..12406117 17..129 100 -> Plus
2R 12406176..12406440 130..396 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:40 Download gff for BO31437.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8293510..8293622 17..129 100 -> Plus
arm_2R 8293681..8293945 130..396 99   Plus

BO31437.pep Sequence

Translation from 16 to 412

> BO31437.pep
MKYLMLIALFVVAASATDNDDPISQESNVEYNGKYHYHYELKDGSKATQD
GVLKSVNADHNGESVNGKYSFVADDGKTYVVSYTADENGYLAVGDHLPTP
PPTPVSVLKALEYIRLHPYKTPEQKQASFLDH

BO31437.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Af-PB 126 CG8510-PB 1..126 1..126 666 100 Plus
Cpr49Af-PA 126 CG8510-PA 1..126 1..126 666 100 Plus
Cpr49Aa-PB 144 CG30045-PB 34..135 23..124 224 41.2 Plus
Edg78E-PB 122 CG7673-PB 3..120 2..126 219 39.8 Plus
Edg78E-PA 122 CG7673-PA 3..120 2..126 219 39.8 Plus