BO31440.complete Sequence
355 bp assembled on 2012-03-26
GenBank Submission: KX799031
> BO31440.complete
GAAGTTATCAGTCGACATGCAGTCTAACAAGGTTTTCTTCGTGTTCTTTG
GTATCATCGCCATGGTGATCGCCGCCAGTCTCTCCTCGGATGTTGTGGAC
AAGGGTGATGATGTGATCAGCGATCGTCGTTTCCGTTGGGAATTCTCGCA
GGACTCGGATGAGTCTGCCAACGACTTGCAGGAGGATGATGATGATGATG
ACGATGCCGCGGATGATGACAGCGGCAGTGCATCCGAAGAAATTTTGATC
ATCGAGTATCCTGAAGGCTACGAAAGCGGCTCCAATGAAAGCGCCTCCGA
TGAAAGCGTCTCCGATGAAAGCGCCTCCAATGAATCTGCAAGCTTTCTAG
ACCAT
BO31440.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:15:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13445-RA | 324 | CG13445-PA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:15:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13445-RA | 431 | CG13445-RA | 14..334 | 17..337 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:15:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15809593..15809880 | 50..337 | 1440 | 100 | Plus |
3L | 28110227 | 3L | 15809498..15809533 | 17..52 | 180 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:15:40 has no hits.
BO31440.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-26 11:14:30 Download gff for
BO31440.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13445-RA | 1..321 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:41 Download gff for
BO31440.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13445-RA | 14..334 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:23:55 Download gff for
BO31440.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13445-RA | 14..334 | 17..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:23:55 Download gff for
BO31440.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15809498..15809531 | 17..50 | 100 | -> | Plus |
3L | 15809594..15809880 | 51..339 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:41 Download gff for
BO31440.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15802598..15802631 | 17..50 | 100 | -> | Plus |
arm_3L | 15802694..15802980 | 51..339 | 99 | | Plus |
BO31440.pep Sequence
Translation from 16 to 355
> BO31440.pep
MQSNKVFFVFFGIIAMVIAASLSSDVVDKGDDVISDRRFRWEFSQDSDES
ANDLQEDDDDDDDAADDDSGSASEEILIIEYPEGYESGSNESASDESVSD
ESASNESASFLDH
BO31440.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13445-PA | 107 | CG13445-PA | 1..107 | 1..107 | 536 | 100 | Plus |