BO31502.complete Sequence
613 bp assembled on 2012-04-18
GenBank Submission: KX799477
> BO31502.complete
GAAGTTATCAGTCGACATGGGCTCGTGCTCGTGTACGCGGCGACACTTTT
TGCTGTCAATATGCTTCCTGCAAGTGATAACGATTATCGAGCGCCAGGTA
TTCGACTTCCTCGGCTACATGTGGGCGCCTATCCTAGTGAACTTTTTCCA
CATTTTGTTCATCATATTCGGGTTTTACGGCGCCTACCACTTTCGCGTTA
AATACATCATCACCTATCTAATATGGAACTTCCTGTGGATCGGGTGGAAT
ACCTTCCTCATTTGCTTCTACTTAAATGTGGGGCAGTTGAACAGGGACAG
TGACCTGCTCAACCTGGGCACTGGCAGCGTCTCCTGGTTCGAGGCGAATG
GGTACGGTTGCAAGCCCACCTATAACATGGCCGCGGACGATACGTTCCGT
CCCCAGCGGCCGGAGCGCGTGGAAGGCTGCCTGCTGGACTACCCGCTGGT
GGAGATCACCCACTCGGGGGTACAGTGCGCTCTGGCGCTGCTCGGCATAC
TCGGTGCGATTCTGATTAGTTGCATATTTCTTGACGAGGACGACAGATGT
AAGTGGCGCTCTCTGAATGCGAATAAGAAACATGCTCGCCTGTCAGCAAG
CTTTCTAGACCAT
BO31502.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:01:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NKAIN-RI | 582 | CG34413-PI | 1..579 | 17..595 | 2895 | 100 | Plus |
| NKAIN-RL | 600 | CG34413-PL | 1..532 | 17..548 | 2660 | 100 | Plus |
| NKAIN-RJ | 1680 | CG34413-PJ | 1..532 | 17..548 | 2660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:01:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NKAIN-RI | 1571 | CG34413-RI | 387..965 | 17..595 | 2895 | 100 | Plus |
| NKAIN-RL | 2366 | CG34413-RL | 387..918 | 17..548 | 2660 | 100 | Plus |
| NKAIN-RJ | 2311 | CG34413-RJ | 387..918 | 17..548 | 2660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:01:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24883420..24883612 | 295..487 | 965 | 100 | Plus |
| 2R | 25286936 | 2R | 24883076..24883214 | 76..214 | 695 | 100 | Plus |
| 2R | 25286936 | 2R | 24883673..24883781 | 487..595 | 545 | 100 | Plus |
| 2R | 25286936 | 2R | 24883278..24883359 | 215..296 | 410 | 100 | Plus |
| 2R | 25286936 | 2R | 24882960..24883019 | 17..76 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:01:10 has no hits.
BO31502.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:30 Download gff for
BO31502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 405..983 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:30 Download gff for
BO31502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 387..965 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:04 Download gff for
BO31502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NKAIN-RI | 387..965 | 17..597 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:04 Download gff for
BO31502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24883077..24883214 | 77..214 | 100 | -> | Plus |
| 2R | 24883278..24883358 | 215..295 | 100 | -> | Plus |
| 2R | 24883421..24883612 | 296..487 | 100 | -> | Plus |
| 2R | 24882960..24883019 | 17..76 | 100 | -> | Plus |
| 2R | 24883674..24883781 | 488..597 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:30 Download gff for
BO31502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20770483..20770542 | 17..76 | 100 | -> | Plus |
| arm_2R | 20770600..20770737 | 77..214 | 100 | -> | Plus |
| arm_2R | 20770801..20770881 | 215..295 | 100 | -> | Plus |
| arm_2R | 20770944..20771135 | 296..487 | 100 | -> | Plus |
| arm_2R | 20771197..20771304 | 488..597 | 98 | | Plus |
BO31502.pep Sequence
Translation from 16 to 613
> BO31502.pep
MGSCSCTRRHFLLSICFLQVITIIERQVFDFLGYMWAPILVNFFHILFII
FGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICFYLNVGQLNRDSDLLNL
GTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLDYPLVEITHS
GVQCALALLGILGAILISCIFLDEDDRCKWRSLNANKKHARLSASFLDH
BO31502.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NKAIN-PI | 193 | CG34413-PI | 1..193 | 1..193 | 1057 | 100 | Plus |
| NKAIN-PJ | 559 | CG34413-PJ | 1..196 | 1..196 | 973 | 91.8 | Plus |
| NKAIN-PL | 199 | CG34413-PL | 1..177 | 1..177 | 968 | 100 | Plus |
| NKAIN-PH | 658 | CG34413-PH | 1..177 | 1..177 | 968 | 100 | Plus |
| NKAIN-PG | 658 | CG34413-PG | 1..177 | 1..177 | 968 | 100 | Plus |
