BO31503.complete Sequence
766 bp assembled on 2012-04-18
GenBank Submission: KX798568
> BO31503.complete
GAAGTTATCAGTCGACATGGCTCAAAACTTGACCATGTTGGTGGCTGAAA
GCAACAGCAGTAACAATAGTACAACCAACAGCAATGAAAACAACAATAGT
AGCAACACGCCAGTCAATTTCAAGCCAAAGGATACGAATGGCTGGAAGGA
TTACAAGAAACTAAAGACATATCTCATCCTAAAGGATCAGCAAAGCGAAA
AGGCATCTCATAAACCGGAGTCGGAGCGATCTTATCTCCTGAGAAAACGC
TCCACGCCCGCGGCCGAAAGAACCACTTTCGTTTGCTACACCTGTGGCAC
GGACACGCCCTCCTCGCAACTTCGCCTTGTCTACTGCTGCCCGAATGCCG
AAAGGGAGCCCTATTATCCATTCATCAAGACCATGAAGGTCTACAAAAAC
GCTAGTCCAATTAGCCCGCAAGGCATGGTCCAGGTCTGCTCCACCTGCAA
CGAGAAGCACTCCGGCTTGGCGGAGGGCGGTCCACCTCCAGCTTCATCCA
GCATCCACTCCGCAGTGGGTGGAGGTTCGCCCAGTGCTGGCCACTCGCTG
GAATCGAATTCGGCCATGTACAGCACCAGTGGAGCGATAACCGGAAATAG
TGGGGCACAATTTGGGGGTCGTAACTCACCATCCGAGAAATCCCTGGCCA
ATTCGGACTCCATGAGTAATGTGCGATTTAGGGTAAGGAATTCGCCGATA
ACTGGTAGAACGATAGGGTCGGAATTGGAATTCTTCTCTTCACTGAAGGC
AAGCTTTCTAGACCAT
BO31503.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:01:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| px-RB | 4608 | CG4444-PB | 1..666 | 17..682 | 3330 | 100 | Plus |
| px-RE | 5751 | CG4444-PE | 1565..2046 | 201..682 | 2410 | 100 | Plus |
| px-RA | 5988 | CG4444-PA | 1565..2046 | 201..682 | 2410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:01:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| px-RB | 5214 | CG4444-RB | 308..973 | 17..682 | 3330 | 100 | Plus |
| px-RE | 8360 | CG4444-RE | 2140..2621 | 201..682 | 2410 | 100 | Plus |
| px-RA | 6842 | CG4444-RA | 2120..2601 | 201..682 | 2410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22540371..22540698 | 748..421 | 1640 | 100 | Minus |
| 2R | 25286936 | 2R | 22540757..22540979 | 423..201 | 1115 | 100 | Minus |
| 2R | 25286936 | 2R | 22543329..22543515 | 203..17 | 935 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 05:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6804..6862 | 50..108 | 142 | 71.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1098..1176 | 50..128 | 142 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2362..2419 | 50..107 | 128 | 69 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1153 | 50..96 | 111 | 74.5 | Plus |
BO31503.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:31 Download gff for
BO31503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| px-RC | 306..1037 | 17..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:33 Download gff for
BO31503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| px-RB | 308..973 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:13 Download gff for
BO31503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| px-RB | 308..973 | 17..682 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:13 Download gff for
BO31503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22540369..22540696 | 423..750 | 99 | <- | Minus |
| 2R | 22540758..22540977 | 203..422 | 100 | <- | Minus |
| 2R | 22543330..22543515 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:33 Download gff for
BO31503.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18427874..18428201 | 423..750 | 99 | <- | Minus |
| arm_2R | 18428263..18428482 | 203..422 | 100 | <- | Minus |
| arm_2R | 18430835..18431020 | 17..202 | 100 | | Minus |
BO31503.pep Sequence
Translation from 16 to 766
> BO31503.pep
MAQNLTMLVAESNSSNNSTTNSNENNNSSNTPVNFKPKDTNGWKDYKKLK
TYLILKDQQSEKASHKPESERSYLLRKRSTPAAERTTFVCYTCGTDTPSS
QLRLVYCCPNAEREPYYPFIKTMKVYKNASPISPQGMVQVCSTCNEKHSG
LAEGGPPPASSSIHSAVGGGSPSAGHSLESNSAMYSTSGAITGNSGAQFG
GRNSPSEKSLANSDSMSNVRFRVRNSPITGRTIGSELEFFSSLKASFLDH
BO31503.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| px-PB | 1535 | CG4444-PB | 1..222 | 1..222 | 1168 | 100 | Plus |
| px-PE | 1916 | CG4444-PE | 486..682 | 26..222 | 856 | 85.9 | Plus |
| px-PA | 1995 | CG4444-PA | 486..682 | 26..222 | 856 | 85.9 | Plus |
