Clone BO31504 Report

Search the DGRC for BO31504

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG12522-RA
Protein status:BO31504.pep: Imported from assembly
Sequenced Size:445

Clone Sequence Records

BO31504.complete Sequence

445 bp assembled on 2012-04-18

GenBank Submission: KX799383

> BO31504.complete
GAAGTTATCAGTCGACATGCGTCCTATTCTTGCGCTATCCCTGGCCGTCC
TGGCCACGCTGGTTGTCCTGTCCTCGCAGGCAACCTCAACATCGCCCACG
AGTAGCTCTTCCACTTCGCCGACGAGTAGCTCTTCCACTTCGCCCACGAG
CAGTTCCTCCACCTCGCCAACGAGCAGTTCCTCCTCATCGGACACAACGG
CCACTACCACGACCACAACTGCCGCGACCACCACCACCACAAGCACAACT
GAGGAGTCCAAGAAGAAACATCGCCGCAGGCACCGCCGCCGGAGGATCAT
CATCATCCGACGCGTTGGCGGTGGATTAAGGCGCCGCAGAGAGCGCGACG
GCGACGAGGATGGTGGCCGCGTCGTGAGGCGCATCCGTGTGCGCGAAGGA
AGATTCAGGCGTCGTGATGCCTTCTTCGCAAGCTTTCTAGACCAT

BO31504.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG12522-RA 414 CG12522-PA 1..411 17..427 2055 100 Plus
CG32071-RA 453 CG32071-PA 30..174 16..160 605 94.5 Plus
CG12522-RA 414 CG12522-PA 76..144 116..184 240 89.9 Plus
CG12522-RA 414 CG12522-PA 100..168 92..160 240 89.9 Plus
CG32071-RA 453 CG32071-PA 106..176 116..186 205 85.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG12522-RA 498 CG12522-RA 29..439 17..427 2055 100 Plus
CG32071-RA 453 CG32071-RA 30..174 16..160 605 94.5 Plus
CG12522-RA 498 CG12522-RA 104..172 116..184 240 89.9 Plus
CG12522-RA 498 CG12522-RA 128..196 92..160 240 89.9 Plus
CG32071-RA 453 CG32071-RA 106..176 116..186 205 85.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11108263..11108673 17..427 2055 100 Plus
3L 28110227 3L 11103700..11103844 160..16 605 94.5 Minus
3L 28110227 3L 11108338..11108406 116..184 240 89.9 Plus
3L 28110227 3L 11108362..11108430 92..160 240 89.9 Plus
3L 28110227 3L 11103698..11103768 186..116 205 85.9 Minus
Blast to na_te.dros performed on 2014-11-28 05:01:45 has no hits.

BO31504.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:31 Download gff for BO31504.complete
Subject Subject Range Query Range Percent Splice Strand
CG12522-RA 1..411 17..429 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:34 Download gff for BO31504.complete
Subject Subject Range Query Range Percent Splice Strand
CG12522-RA 29..439 17..429 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:16 Download gff for BO31504.complete
Subject Subject Range Query Range Percent Splice Strand
CG12522-RA 29..439 17..429 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:16 Download gff for BO31504.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11108263..11108673 17..429 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:34 Download gff for BO31504.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11101363..11101773 17..429 99   Plus

BO31504.pep Sequence

Translation from 16 to 445

> BO31504.pep
MRPILALSLAVLATLVVLSSQATSTSPTSSSSTSPTSSSSTSPTSSSSTS
PTSSSSSSDTTATTTTTTAATTTTTSTTEESKKKHRRRHRRRRIIIIRRV
GGGLRRRRERDGDEDGGRVVRRIRVREGRFRRRDAFFASFLDH

BO31504.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG12522-PA 137 CG12522-PA 1..137 1..137 660 100 Plus
CG32071-PA 150 CG32071-PA 11..149 1..132 387 68.5 Plus
CG15741-PA 135 CG15741-PA 4..129 7..124 204 41.3 Plus
CG32198-PB 136 CG32198-PB 5..134 5..132 198 45.2 Plus
CG34105-PA 157 CG34105-PA 1..155 1..133 192 39.5 Plus