BO31506.complete Sequence
832 bp assembled on 2012-04-18
> BO31506.complete
GAAGTTATCAGTCGACATGAAACTGTTCCTGCTAACTCTCTCCGCGGCTT
TGGCCCTGGTGGCCGCCTCCCCGACCGGTCTGAACCGCACCACCCTCCTG
TCCCAGGGAGCCGAGGGTCGCATTGTCAACGGCTACCCAGCGCCCGAGGG
CAAGGCTCCCTACATTGTGGGCCTGTTCATCCGTACCGATGGAAGCAACA
GTGGTGCCGTTGGTGCTGGTACCATCATTGCCAACGACTGGATCCTGACT
GCCGCCCATTGCTTGACCGGAGACTACGTGGAGATCCACTACGGATCCAA
CTGGGGCTGGAACGGTGCCTACAGGCAGACCGTCCGTCGCGACAACTTCA
TTAGCCACCCCGACTGGCCTTCCCAGGGCGGCCGAGACATTGGTCTGATC
CGCACTCCCCATGTCGACTTCAACGGACTGATCAACAAGATCCCTCTGCC
AAGCATGAACGAGCAGAACGACCGCTACCAGGACACCTGGTGCGTCGCTT
GCGGATGGGGTGGTATGGACAACGGAAACCTGGCCGACTGGCTGCAGTGC
GTCGATGTCCAGATCATCAGCAACAGCGAGTGCGAGCAGGCCTACGGCTC
GGTTGCCAGTACCGACATGTGCACCCGTCACGCCGACGGAAAGTCCGTGT
GCGGAGGTGACTCCGGTGGCCCCCTGGTTACACACGACAATGCTCGTCTC
GTCGGTGTGATCACCTTTGCCTCCGTCAGCTGCCACGACGGACCCTCTGG
CTACACCCGCGTCTCGGACTACCTAGAATGGATCCGCGACCAGACTGGCA
TCTCCTACGCAAGCTTTCTAGACCATTCGTGG
BO31506.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:02:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18180-RA | 795 | CG18180-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
| CG18179-RA | 807 | CG18179-PA | 97..804 | 101..808 | 1680 | 82.5 | Plus |
| CG8329-RA | 780 | CG8329-PA | 454..752 | 488..786 | 370 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:02:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18180-RA | 901 | CG18180-RA | 19..811 | 16..808 | 3965 | 100 | Plus |
| CG18179-RA | 870 | CG18179-RA | 115..822 | 101..808 | 1680 | 82.5 | Plus |
| CG8329-RA | 910 | CG8329-RA | 469..767 | 488..786 | 370 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9641031..9641823 | 16..808 | 3965 | 100 | Plus |
| 3L | 28110227 | 3L | 9639385..9640092 | 101..808 | 1680 | 82.5 | Plus |
| 3L | 28110227 | 3L | 9638580..9638878 | 488..786 | 370 | 74.9 | Plus |
| 2L | 23513712 | 2L | 4950101..4950299 | 688..493 | 285 | 77.4 | Minus |
| 3R | 32079331 | 3R | 30489091..30489152 | 114..175 | 190 | 87.1 | Plus |
| 2L | 23513712 | 2L | 4952287..4952347 | 808..748 | 185 | 86.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:02:04 has no hits.
BO31506.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:33 Download gff for
BO31506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18180-RA | 17..813 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:38 Download gff for
BO31506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18180-RA | 20..816 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:23 Download gff for
BO31506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18180-RA | 20..816 | 17..816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:23 Download gff for
BO31506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9641032..9641828 | 17..816 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:38 Download gff for
BO31506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9634132..9634928 | 17..816 | 99 | | Plus |
BO31506.pep Sequence
Translation from 16 to 832
> BO31506.pep
MKLFLLTLSAALALVAASPTGLNRTTLLSQGAEGRIVNGYPAPEGKAPYI
VGLFIRTDGSNSGAVGAGTIIANDWILTAAHCLTGDYVEIHYGSNWGWNG
AYRQTVRRDNFISHPDWPSQGGRDIGLIRTPHVDFNGLINKIPLPSMNEQ
NDRYQDTWCVACGWGGMDNGNLADWLQCVDVQIISNSECEQAYGSVASTD
MCTRHADGKSVCGGDSGGPLVTHDNARLVGVITFASVSCHDGPSGYTRVS
DYLEWIRDQTGISYASFLDHSW
BO31506.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18180-PA | 264 | CG18180-PA | 1..264 | 1..264 | 1439 | 100 | Plus |
| CG18179-PA | 268 | CG18179-PA | 1..268 | 1..264 | 1221 | 83.6 | Plus |
| CG8329-PA | 259 | CG8329-PA | 4..258 | 2..264 | 874 | 61.6 | Plus |
| Jon25Bi-PB | 266 | CG8867-PB | 1..265 | 1..264 | 662 | 49.8 | Plus |
| Jon25Biii-PA | 258 | CG8871-PA | 1..258 | 1..264 | 649 | 50.4 | Plus |
