BO31507.complete Sequence
478 bp assembled on 2012-04-18
GenBank Submission: KX799607
> BO31507.complete
GAAGTTATCAGTCGACATGGATAATCTGGGCGTCGTGCTCCTGGTCCTGT
GCGCCTTCAGCTTCCTGCTCTTTCTCCTGCGAGTGCTTCTGATTGCCTGT
CGCTCGTACTCGATGTCGTTGCGCCCGAAGCAGGAACAAGCCCGTCGCCA
AATGGAGATCAATGTGACGAACAATTGCAACGGCGGCTCCGGAGGAGTCG
GAAACGTGTGCTCAAACAGCCAGAACGAAGTTAGTGTCCTGCCCAAGACC
TTGGATTTGCCGCCCAGCTACGACGAGGCCGCTTTTAGCGAGCGAAAGCA
GGACAGCACACTGACCATAGCCACCAGCTTGGAAGCGAGCAATCCCAATT
TGGCGGTTGGAATTAACGAACCACCGCCGGTTTACGAGGCGAACGTGGCC
ACAACCACCACTTCCACCACCACCACCGTATTTTTGGTCAACGGCCAACC
ACCAGTGGTGGCAAGCTTTCTAGACCAT
BO31507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4741-RB | 447 | CG4741-PB | 1..444 | 17..460 | 2220 | 100 | Plus |
| CG4741-RA | 624 | CG4741-PA | 296..621 | 135..460 | 1615 | 99.7 | Plus |
| CG4741-RC | 312 | CG4741-PC | 1..309 | 152..460 | 1545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4741-RB | 854 | CG4741-RB | 245..692 | 13..460 | 2225 | 99.8 | Plus |
| CG4741-RA | 881 | CG4741-RA | 394..719 | 135..460 | 1615 | 99.7 | Plus |
| CG4741-RC | 880 | CG4741-RC | 437..758 | 139..460 | 1610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24610963..24611284 | 460..139 | 1610 | 100 | Minus |
| 2R | 25286936 | 2R | 24614842..24614914 | 85..13 | 350 | 98.6 | Minus |
| 2R | 25286936 | 2R | 24614729..24614786 | 140..83 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:02:19 has no hits.
BO31507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:34 Download gff for
BO31507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4741-RB | 231..674 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:40 Download gff for
BO31507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4741-RB | 249..692 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:27 Download gff for
BO31507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4741-RB | 249..692 | 17..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:27 Download gff for
BO31507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24610961..24611282 | 141..462 | 99 | <- | Minus |
| 2R | 24614729..24614786 | 83..140 | 100 | <- | Minus |
| 2R | 24614845..24614910 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:40 Download gff for
BO31507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20498484..20498805 | 141..462 | 99 | <- | Minus |
| arm_2R | 20502252..20502309 | 83..140 | 100 | <- | Minus |
| arm_2R | 20502368..20502433 | 17..82 | 100 | | Minus |
BO31507.pep Sequence
Translation from 16 to 478
> BO31507.pep
MDNLGVVLLVLCAFSFLLFLLRVLLIACRSYSMSLRPKQEQARRQMEINV
TNNCNGGSGGVGNVCSNSQNEVSVLPKTLDLPPSYDEAAFSERKQDSTLT
IATSLEASNPNLAVGINEPPPVYEANVATTTTSTTTTVFLVNGQPPVVAS
FLDH
BO31507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4741-PB | 148 | CG4741-PB | 1..148 | 1..148 | 750 | 100 | Plus |
| CG4741-PA | 207 | CG4741-PA | 62..207 | 6..148 | 569 | 78.8 | Plus |
| CG4741-PC | 103 | CG4741-PC | 1..103 | 46..148 | 530 | 100 | Plus |
