BO31511.complete Sequence
1531 bp assembled on 2012-04-30
GenBank Submission: KX797966
> BO31511.complete
GAAGTTATCAGTCGACATGGATAGCGAGATACAAGGATTCTTTAAGAACA
AGACCGTGTTCCTTACGGGTGGCACCGGATTTCTGGGAAAAGTGATCATT
GAGAAACTACTGAGGACCACGGAAGTCAATCGGATTTACTCCTTAATTAG
ACCTAAGCGGGGAGTGCCTATCGAGGACCGAATCACAACCTGGGCAAAGG
ATCCGGTGTTTGAGGTGCTCCTAAGGACGAAGCCAGATGCCTTGCAGCGA
GTTTGTCCCATCGCGGGCGACTGCTTGGATCCGGATCTGGGTATAAGCCA
ATCGGATCAAAGGATCCTGACCGCCGAGGTGCAGATTGTAATCCATGGAG
CTGCAACCGTGCGATTCGACGAGGCTTTACACATCTCCTTGGCCATCAAT
GTACGAGCCACTCGTCTGATGCTTCAACTGGCCAAGCAGATGACCCAGCT
GGTGTCCTTCGTTCACGTATCCACTGCCTACTCCAACTGCGTGGTGCATG
ACATCGCAGAGCGATTCTATCCGGAGCACTTGAACTGCAGTTCGGATAAG
ATCCTAGCCGTGGGTGAACTGGTAAGCAATAAATTACTGGACGCGATGGA
ACCTAGCCTTGTTGGCTCCTTCCCCAACACGTACACCTACACCAAAGCCC
TGGCCGAGGATGTGATCCTGCGGGAGGCGGGCAACCTGCCACTGTCCATC
TTCCGACCGGCGATCATAATGTCCACTTACAAGGAGCCCCTGGTTGGATG
GGTGGACAACCTATTCGGACCACTGGCCCTCTGCTTCGGCGGAGCTCGCG
GTATAATGCGGGTCACCACGGTGGACCCTTCAGCCAAGATCAGCCTAGTT
CCCGCTGACTACTGCGTAAATGTGGCATTGGCTTGCGCTTGGAGAACGGC
GGAGATATCCGTACAGAATGGAAAGGTCACGACGCCCCCCATTTACGCGT
TTGCACCTAGCGAGAATAACCTGATGAGCTACGGAAACTTTATCAAATCA
TCTATTATCTATCGGGACATCATACCGCTAACCAAGATGCTGTGGTATCC
CTTCGTCCTGTGCATCTCCACCACATCCCTATTTCCGCTGGCCGCCTTCT
TCTTACACACCCTTCCCGGCTACTTCTTCGATCTGCTGCTGCGCCTCAAG
GGCCGGAAGCCCATACTCGTGGATCTGTATCGGAAGATTCACAAGAACAT
CGCCGTCCTGGGTCCGTTCTCCAGTACCACCTGGAACTTTGACATGACCA
ACACAATGGAGCTAAGGGAAGCGATGTCCAAGCAGGATCGCAACCTTTAC
GACTTCGACATGGCCCAGTTGGATTGGAATGACTATTTCAAGGCCGCCAT
GTATGGAATGCGTCTCTATATTGGCAAGGAGAAACCCACCGCGGAGTCCA
TTGCCAAGGGTCTGAAGCTGAGGATGCGCCTGAAGGTCCTTCACTATGCA
TTCGCATCCTCGCTGGTTGCTTTAGCTGGTTACATCCTGTATTCTCTGGC
CAGACTTGTAGTTGCAAGCTTTCTAGACCAT
BO31511.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:33:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17560-RA | 1500 | CG17560-PA | 1..1497 | 17..1513 | 7485 | 100 | Plus |
| CG17562-RA | 1500 | CG17562-PA | 1..695 | 17..711 | 730 | 73.7 | Plus |
| CG10096-RD | 1509 | CG10096-PD | 310..541 | 326..557 | 305 | 75.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:33:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17560-RA | 1712 | CG17560-RA | 32..1528 | 17..1513 | 7485 | 100 | Plus |
| CG17562-RA | 1674 | CG17562-RA | 101..795 | 17..711 | 730 | 73.7 | Plus |
| CG10097-RC | 4716 | CG10097-RC | 3294..3525 | 326..557 | 305 | 75.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:33:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16618843..16619554 | 717..1428 | 3560 | 100 | Plus |
| 3R | 32079331 | 3R | 16618276..16618787 | 205..716 | 2560 | 100 | Plus |
| 3R | 32079331 | 3R | 16618105..16618222 | 91..208 | 590 | 100 | Plus |
| 3R | 32079331 | 3R | 16615697..16616159 | 249..711 | 575 | 74.9 | Plus |
| 3R | 32079331 | 3R | 16619609..16619694 | 1428..1513 | 430 | 100 | Plus |
| 3R | 32079331 | 3R | 16617981..16618056 | 17..92 | 380 | 100 | Plus |
| 3R | 32079331 | 3R | 12392007..12392238 | 557..326 | 305 | 75.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:33:54 has no hits.
BO31511.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:11 Download gff for
BO31511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17560-RA | 32..1528 | 17..1515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:50 Download gff for
BO31511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17560-RA | 32..1528 | 17..1515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:57 Download gff for
BO31511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17560-RA | 32..1528 | 17..1515 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:57 Download gff for
BO31511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16617981..16618056 | 17..92 | 100 | -> | Plus |
| 3R | 16618107..16618219 | 93..205 | 100 | -> | Plus |
| 3R | 16618277..16618787 | 206..716 | 100 | -> | Plus |
| 3R | 16618843..16619554 | 717..1428 | 100 | -> | Plus |
| 3R | 16619610..16619694 | 1429..1515 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:50 Download gff for
BO31511.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12443703..12443778 | 17..92 | 100 | -> | Plus |
| arm_3R | 12443829..12443941 | 93..205 | 100 | -> | Plus |
| arm_3R | 12443999..12444509 | 206..716 | 100 | -> | Plus |
| arm_3R | 12444565..12445276 | 717..1428 | 100 | -> | Plus |
| arm_3R | 12445332..12445416 | 1429..1515 | 97 | | Plus |
BO31511.pep Sequence
Translation from 16 to 1531
> BO31511.pep
MDSEIQGFFKNKTVFLTGGTGFLGKVIIEKLLRTTEVNRIYSLIRPKRGV
PIEDRITTWAKDPVFEVLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRI
LTAEVQIVIHGAATVRFDEALHISLAINVRATRLMLQLAKQMTQLVSFVH
VSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGELVSNKLLDAMEPSLVG
SFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLF
GPLALCFGGARGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAEISVQ
NGKVTTPPIYAFAPSENNLMSYGNFIKSSIIYRDIIPLTKMLWYPFVLCI
STTSLFPLAAFFLHTLPGYFFDLLLRLKGRKPILVDLYRKIHKNIAVLGP
FSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDWNDYFKAAMYGMRL
YIGKEKPTAESIAKGLKLRMRLKVLHYAFASSLVALAGYILYSLARLVVA
SFLDH
BO31511.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17560-PA | 499 | CG17560-PA | 1..499 | 1..499 | 2566 | 100 | Plus |
| CG17562-PA | 499 | CG17562-PA | 1..499 | 1..499 | 1690 | 62.9 | Plus |
| CG14893-PB | 510 | CG14893-PB | 12..510 | 1..499 | 1651 | 60.1 | Plus |
| CG10096-PD | 502 | CG10096-PD | 1..502 | 1..503 | 1436 | 53.8 | Plus |
| CG10096-PB | 502 | CG10096-PB | 1..502 | 1..503 | 1436 | 53.8 | Plus |
