Clone BO31515 Report

Search the DGRC for BO31515

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG16995-RA
Protein status:BO31515.pep: Imported from assembly
Sequenced Size:472

Clone Sequence Records

BO31515.complete Sequence

472 bp assembled on 2012-04-18

GenBank Submission: KX795594

> BO31515.complete
GAAGTTATCAGTCGACATGAGCGCTCAACAATTTGAGCAAGAAGTTCTTC
AAGCCCACAATTTATATCGGGCCAAGCATGGTGCTCAACCCTTGACTTTG
AGTCCCAAACTGAATCGATTGGCCACGGAATGGGCCAATTATTTGCTGTC
CAGAAATCGCATGGAACATCGACAGAACAGTGGATATGGTGAGAACATTT
ACATGGCCTCCGGGGGAAATCTGAAAGGTGCCGATGCCGTCAGATCCTGG
TACGAAGAGATTCGACAGTACAATTGGAATTCTCCGTCGTTTCAAGGTAA
CACCGGCCATTTCACTCAGGTGGTCTGGAAGAGCTCCACCGAGCTAGGCG
TGGGTTTTGCGAAGAGTGGCAGTACCATCTATGTTGTGTGCAACTACAAT
CCCCCTGGCAACTACAACAACTTGTTCAGGGAGAATGTCGCACCCCCAAT
GCAAGCAAGCTTTCTAGACCAT

BO31515.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG16995-RA 441 CG16995-PA 1..438 17..454 2190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG16995-RA 721 CG16995-RA 80..517 17..454 2190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2308305..2308531 140..366 1135 100 Plus
2L 23513712 2L 2308142..2308249 32..139 540 100 Plus
2L 23513712 2L 2308579..2308668 365..454 450 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:03:26 has no hits.

BO31515.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:40 Download gff for BO31515.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 80..517 17..456 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:51 Download gff for BO31515.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 80..517 17..456 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:50 Download gff for BO31515.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 80..517 17..456 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:50 Download gff for BO31515.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2308142..2308249 32..139 100 -> Plus
2L 2308305..2308531 140..366 100 -> Plus
2L 2308581..2308668 367..456 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:51 Download gff for BO31515.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2308142..2308249 32..139 100 -> Plus
arm_2L 2308305..2308531 140..366 100 -> Plus
arm_2L 2308581..2308668 367..456 97   Plus

BO31515.pep Sequence

Translation from 16 to 472

> BO31515.pep
MSAQQFEQEVLQAHNLYRAKHGAQPLTLSPKLNRLATEWANYLLSRNRME
HRQNSGYGENIYMASGGNLKGADAVRSWYEEIRQYNWNSPSFQGNTGHFT
QVVWKSSTELGVGFAKSGSTIYVVCNYNPPGNYNNLFRENVAPPMQASFL
DH

BO31515.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG16995-PA 146 CG16995-PA 1..146 1..146 791 100 Plus
CG4270-PA 170 CG4270-PA 31..168 6..143 374 48.6 Plus
CG34049-PB 306 CG34049-PB 146..282 7..143 314 45.3 Plus
CG31482-PA 195 CG31482-PA 23..162 7..146 289 41.3 Plus
CG4270-PB 142 CG4270-PB 31..141 6..116 286 46.8 Plus