Clone BO31517 Report

Search the DGRC for BO31517

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG4325-RA
Protein status:BO31517.pep: Imported from assembly
Sequenced Size:508

Clone Sequence Records

BO31517.complete Sequence

508 bp assembled on 2012-04-18

GenBank Submission: KX796390

> BO31517.complete
GAAGTTATCAGTCGACATGGGCCGTAACAACGTCATCTGCACGATCTGCT
CGGAGCGGTTTCGCACCTCGGACAATATACAAGCCGGCAGCTGCGGACAC
GCGTTCCACGAGGACTGCCTAGACCACTGGAGAAAGCAATCAAGGACTTG
CCCTATCTGCCGCAGCCAGGATGCCGCCTACTTTCAGCTTTATCTGGACT
TTGAGGAGTTTCCGGAAAGTGCATCGGCTCAGGGTGGCAGTTGGGGCGGC
CATAATCGGAGCCAAGGTCACAGCAGCAGCAGCAGCAGCTGCAGCAGCAA
CAACAACAACAGTAACGACAACAGCAGCAGTGACGATTATATTGGAATTA
TGAGGGAGTACGAGAATCTACTTTACGAGACGGGCGTGTACCGAGAAGAG
ATCGAATATCTTAACCAGCGGATCGGAGCCCTTACTGTCCTCAATGCTGA
ACTCAGCAAACTACATGAATGTTCGGATTCGGATGTTGATGCAAGCTTTC
TAGACCAT

BO31517.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG4325-RB 477 CG4325-PB 1..474 17..490 2370 100 Plus
CG4325-RA 477 CG4325-PA 1..474 17..490 2370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG4325-RB 897 CG4325-RB 92..565 17..490 2370 100 Plus
CG4325-RA 583 CG4325-RA 92..565 17..490 2370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2043062..2043413 490..139 1760 100 Minus
X 23542271 X 2043606..2043727 138..17 610 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:03:31 has no hits.

BO31517.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:41 Download gff for BO31517.complete
Subject Subject Range Query Range Percent Splice Strand
CG4325-RA 92..565 17..492 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:53 Download gff for BO31517.complete
Subject Subject Range Query Range Percent Splice Strand
CG4325-RA 92..565 17..492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:52 Download gff for BO31517.complete
Subject Subject Range Query Range Percent Splice Strand
CG4325-RA 92..565 17..492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:52 Download gff for BO31517.complete
Subject Subject Range Query Range Percent Splice Strand
X 2043060..2043413 139..492 99 <- Minus
X 2043606..2043727 17..138 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:53 Download gff for BO31517.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1937093..1937446 139..492 99 <- Minus
arm_X 1937639..1937760 17..138 100   Minus

BO31517.pep Sequence

Translation from 16 to 508

> BO31517.pep
MGRNNVICTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRS
QDAAYFQLYLDFEEFPESASAQGGSWGGHNRSQGHSSSSSSCSSNNNNSN
DNSSSDDYIGIMREYENLLYETGVYREEIEYLNQRIGALTVLNAELSKLH
ECSDSDVDASFLDH

BO31517.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG4325-PB 158 CG4325-PB 1..158 1..158 856 100 Plus
CG4325-PA 158 CG4325-PA 1..158 1..158 856 100 Plus
CG10916-PB 263 CG10916-PB 29..94 5..67 168 50 Plus
CG10916-PA 263 CG10916-PA 29..94 5..67 168 50 Plus