BO31518.complete Sequence
487 bp assembled on 2012-04-18
GenBank Submission: KX795647
> BO31518.complete
GAAGTTATCAGTCGACATGCTGGCCCTTTTGCTGATTGCCGGTCAAGGTC
AGGCGGCGCCGGTGAAGACCGAAGGTAGCACCTTGGGCCTTCTGGGCGGT
GGATTTGGTGGCAGTGTAGGACTTAGTGCCGGCATCGGAGTGGGTGGTGG
CCTGTATAGCGGTTTCGGAGGCGGTGGCTATCCTGGTGGCTATGCGAGTG
GCTACCCAGGTGGCTATGGTGGTGGCTACTCAGGCTATAACGGCTACGGA
GGCAGTGGATTCGGAGGTGGCTACTATCCAGGAGGAGGTTACTCCGGCTT
TGGACACAGGCCGCATCACCACGGAGGATACTATCCGGGCGGTGGATCGT
ACCACAATCAGGGCGGATCTTATGGCGGCCACTATAGTCAGTCACAGTAC
TCGAATGGATATTACGGAGGTGGTGGCTATGGAGGCGGTGGCTATGGAGG
CAATGGCTTCTTTGGAAAGGCAAGCTTTCTAGACCAT
BO31518.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Edg91-RB | 456 | CG7539-PB | 1..453 | 17..469 | 2265 | 100 | Plus |
| Edg91-RA | 480 | CG7539-PA | 25..477 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:03:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Edg91-RB | 546 | CG7539-RB | 12..464 | 17..469 | 2265 | 100 | Plus |
| Edg91-RA | 593 | CG7539-RA | 59..511 | 17..469 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:03:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17610938..17611390 | 469..17 | 2265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:03:41 has no hits.
BO31518.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:42 Download gff for
BO31518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg91-RA | 59..511 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:55 Download gff for
BO31518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg91-RA | 59..511 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:57 Download gff for
BO31518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg91-RA | 59..511 | 17..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:57 Download gff for
BO31518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17610936..17611390 | 17..471 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:55 Download gff for
BO31518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13436658..13437112 | 17..471 | 99 | | Minus |
BO31518.pep Sequence
Translation from 16 to 487
> BO31518.pep
MLALLLIAGQGQAAPVKTEGSTLGLLGGGFGGSVGLSAGIGVGGGLYSGF
GGGGYPGGYASGYPGGYGGGYSGYNGYGGSGFGGGYYPGGGYSGFGHRPH
HHGGYYPGGGSYHNQGGSYGGHYSQSQYSNGYYGGGGYGGGGYGGNGFFG
KASFLDH
BO31518.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Edg91-PB | 151 | CG7539-PB | 1..151 | 1..151 | 867 | 100 | Plus |
| Edg91-PA | 159 | CG7539-PA | 9..159 | 1..151 | 867 | 100 | Plus |
| CG14191-PA | 193 | CG14191-PA | 17..140 | 24..147 | 250 | 46.4 | Plus |
| CG17108-PA | 342 | CG17108-PA | 109..238 | 27..150 | 235 | 45.5 | Plus |
| CG14191-PA | 193 | CG14191-PA | 19..177 | 7..154 | 229 | 40.1 | Plus |
| CG5172-PD | 172 | CG5172-PD | 18..158 | 21..150 | 229 | 43.1 | Plus |
| CG17108-PA | 342 | CG17108-PA | 103..220 | 27..148 | 222 | 48.4 | Plus |
| CG17108-PA | 342 | CG17108-PA | 192..329 | 7..153 | 219 | 41.1 | Plus |
| CG17108-PA | 342 | CG17108-PA | 179..297 | 27..147 | 217 | 45.2 | Plus |
| CG17108-PA | 342 | CG17108-PA | 51..197 | 24..153 | 216 | 45 | Plus |
| CG14191-PA | 193 | CG14191-PA | 55..193 | 24..154 | 215 | 40 | Plus |
| CG17108-PA | 342 | CG17108-PA | 167..291 | 24..147 | 215 | 45.3 | Plus |
| CG17108-PA | 342 | CG17108-PA | 27..189 | 9..150 | 213 | 38.6 | Plus |
| CG17108-PA | 342 | CG17108-PA | 143..293 | 27..147 | 209 | 42.5 | Plus |
| CG17108-PA | 342 | CG17108-PA | 185..315 | 27..150 | 204 | 42.6 | Plus |
| CG17108-PA | 342 | CG17108-PA | 24..143 | 27..147 | 193 | 40.2 | Plus |
| CG17108-PA | 342 | CG17108-PA | 227..342 | 27..145 | 188 | 43.5 | Plus |
