BO31521.complete Sequence
919 bp assembled on 2012-04-18
GenBank Submission: KX796426
> BO31521.complete
GAAGTTATCAGTCGACATGATGAAACTGTCCGGTCTTAGGCGGTCCTTAC
CCAGGGACCAAGGATTGGGCAACTGCCTCAACGTGGCACTGATTTACTCA
GCGCTCCTAGCACTTTTCATGACCGCCGCCCAGGGACTACAGCTGAGTGC
CTTCACAACGAAGACGCCGCGGGTCAGCAAGTACACAACCAAGTCGCCAT
CGGCCTCCTCCATGAACCACGATGCCACCGCCTCGCTGTATCGTTTCAAT
GCCACCAACGGCATCACCTGCATTCTGATGCAGGTGGACGGACTTATCAG
CATTAAGTACCGGAACAAGCTGAACGAGGATGTGGAGGCCGATTTGTACA
TGCCGGATGATCCCCAGCTGAGTGGCGAGTGCGTCGAGTCCAACATGGAA
ATTCTCACCATGGACTTTAAGGGTTTCCGGCTGTCCATGACATTTAAAAA
GTCGTCCGGCGGCGAGGGTTGGTATATCAACCTGTTTGAACTGACCTACT
CGTCCTCCAACTGGCTGTTCGAGCACCCCGATCGTCCCAACTTGGACGTG
AGGCTGACCTCGCCCGCCCAGACGCCGATGTACTTCCCCACGCCGGTGGG
TAAGTCCTATGTCTGCGACAAGGAGCAGACTGTGATCATGTACGCCCCGC
ACGATTCCGGCGACCTGTCGGGGCATATAGCCAAGCTGTATCTGCGCGAC
ATGCACATGCAGAGCTTCATGTTCAAGGACAGCGGCAAGTGGGGCCCGTC
CTTCCACTGCAGCGCCACAGGATCCTATCGCGACGAGACAGCGCCCCTGG
CCGTGGGAACTGCACTGGCCATTGCCGTGCTACTGACCATATCCGGATAC
GGCGGTTGGAGATACTTCAAAATCAAGAAGGTTCAGTACGGTTCTATGGA
GGCAAGCTTTCTAGACCAT
BO31521.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:03:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32225-RA | 888 | CG32225-PA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:03:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32225-RA | 1293 | CG32225-RA | 115..999 | 17..901 | 4425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:03:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20304701..20305112 | 861..450 | 2060 | 100 | Minus |
| 3L | 28110227 | 3L | 20305511..20305760 | 451..202 | 1250 | 100 | Minus |
| 3L | 28110227 | 3L | 20306067..20306169 | 119..17 | 515 | 100 | Minus |
| 3L | 28110227 | 3L | 20305821..20305911 | 203..113 | 425 | 97.8 | Minus |
| 3L | 28110227 | 3L | 20304604..20304645 | 901..860 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:03:55 has no hits.
BO31521.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:43 Download gff for
BO31521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32225-RA | 90..974 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:56 Download gff for
BO31521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32225-RA | 115..999 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:03 Download gff for
BO31521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32225-RA | 115..999 | 17..903 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:03 Download gff for
BO31521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20304601..20304643 | 862..903 | 95 | <- | Minus |
| 3L | 20304701..20305110 | 452..861 | 100 | <- | Minus |
| 3L | 20305511..20305759 | 203..451 | 100 | <- | Minus |
| 3L | 20305822..20305904 | 120..202 | 100 | <- | Minus |
| 3L | 20306067..20306169 | 17..119 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:56 Download gff for
BO31521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20298611..20298859 | 203..451 | 100 | <- | Minus |
| arm_3L | 20298922..20299004 | 120..202 | 100 | <- | Minus |
| arm_3L | 20299167..20299269 | 17..119 | 100 | | Minus |
| arm_3L | 20297701..20297743 | 862..903 | 95 | <- | Minus |
| arm_3L | 20297801..20298210 | 452..861 | 100 | <- | Minus |
BO31521.pep Sequence
Translation from 16 to 919
> BO31521.pep
MMKLSGLRRSLPRDQGLGNCLNVALIYSALLALFMTAAQGLQLSAFTTKT
PRVSKYTTKSPSASSMNHDATASLYRFNATNGITCILMQVDGLISIKYRN
KLNEDVEADLYMPDDPQLSGECVESNMEILTMDFKGFRLSMTFKKSSGGE
GWYINLFELTYSSSNWLFEHPDRPNLDVRLTSPAQTPMYFPTPVGKSYVC
DKEQTVIMYAPHDSGDLSGHIAKLYLRDMHMQSFMFKDSGKWGPSFHCSA
TGSYRDETAPLAVGTALAIAVLLTISGYGGWRYFKIKKVQYGSMEASFLD
H
BO31521.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32225-PA | 295 | CG32225-PA | 1..295 | 1..295 | 1552 | 100 | Plus |
