Clone BO31525 Report

Search the DGRC for BO31525

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG18190-RB
Protein status:BO31525.pep: Imported from assembly
Sequenced Size:778

Clone Sequence Records

BO31525.complete Sequence

778 bp assembled on 2012-04-18

GenBank Submission: KX796429

> BO31525.complete
GAAGTTATCAGTCGACATGACTGATTTAAAGTTAACTGTGGCACTAACCA
GCGTTAATGCGGAGAATATGTCGCGGCACGACATGCTTCAGTGGGTGAAC
AACATGGTCCACGGCCACTTCAAGAAGATCGAAGAGCTGTGCTCAGGTGC
TGCCTACTGCCAGATGATGGAGATGATCTTTCCCAACTGCATTAACCTGA
AGCGCGTCAAGATGACCGCCAAACTAGAGCACGAGTATCTACACAATCTT
AGGCTCTTCCAGGAAGCCTTCAATCGCTTGAAGCTGGACAAAACGGTGCC
AATCGATCGACTGATCAAGGGACGCTTCCAGGACAACTTTGAGTTCCTGC
AGTGGTTCAAGAAGTTCTTCGACTCGCAGGCTCCGGGCTTGGAGAACATT
AAGTCGCTGGCCAATGCGCCGTTGGCAAAGCCCATAAAGCCGCGCCAATT
CGCCAAGGAGCGATCACCAGTCAACGCCAATGATGATGCGCTCAAAGAGC
TGATTGATGAAATGAAGAACCTAAGCCTGAAGCGGGAGGACATCATGGAG
GCCAGCAATCAGATCTACAACAAACTGCGCCTGGTCGAGGATTTGGTCAA
CGACATGATCAACAACAACCAGCTAGTTGAGTTGTGCAAACGCATTCAAG
CGGTGCTCTACAAAACGATAGATGGTGAAATCAACGAGGAACCCGTCGAG
GTTAATGAGGATAATGGTGATGAAGGCGCCGAACACGCGGATCCCAATGA
CGGATTATATGCAAGCTTTCTAGACCAT

BO31525.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG18190-RB 747 CG18190-PB 1..744 17..760 3690 99.7 Plus
Eb1-RF 894 CG3265-PF 285..348 310..373 200 87.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG18190-RB 1077 CG18190-RB 281..1024 17..760 3690 99.7 Plus
Eb1-RF 1891 CG3265-RF 480..543 310..373 200 87.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18851960..18852576 760..144 3055 99.7 Minus
2R 25286936 2R 18852632..18852763 148..17 660 100 Minus
2R 25286936 2R 6753244..6753307 310..373 200 87.5 Plus
Blast to na_te.dros performed on 2014-11-28 05:04:15 has no hits.

BO31525.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:45 Download gff for BO31525.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 227..970 17..762 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:02 Download gff for BO31525.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 281..1024 17..762 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:13 Download gff for BO31525.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 281..1024 17..762 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:13 Download gff for BO31525.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18851958..18852573 147..762 99 <- Minus
2R 18852634..18852763 17..146 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:02 Download gff for BO31525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14739463..14740078 147..762 99 <- Minus
arm_2R 14740139..14740268 17..146 100   Minus

BO31525.pep Sequence

Translation from 16 to 778

> BO31525.pep
MTDLKLTVALTSVNAENMSRHDMLQWVNNMVHGHFKKIEELCSGAAYCQM
MEMIFPNCINLKRVKMTAKLEHEYLHNLRLFQEAFNRLKLDKTVPIDRLI
KGRFQDNFEFLQWFKKFFDSQAPGLENIKSLANAPLAKPIKPRQFAKERS
PVNANDDALKELIDEMKNLSLKREDIMEASNQIYNKLRLVEDLVNDMINN
NQLVELCKRIQAVLYKTIDGEINEEPVEVNEDNGDEGAEHADPNDGLYAS
FLDH

BO31525.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG18190-PB 248 CG18190-PB 1..248 1..248 1294 100 Plus
Eb1-PE 290 CG3265-PE 1..276 4..220 417 33.9 Plus
Eb1-PF 297 CG3265-PF 1..123 4..126 417 57.7 Plus
Eb1-PG 291 CG3265-PG 1..121 4..124 414 57.9 Plus
Eb1-PA 291 CG3265-PA 1..121 4..124 414 57.9 Plus