Clone BO31527 Report

Search the DGRC for BO31527

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG3526-RA
Protein status:BO31527.pep: Imported from assembly
Sequenced Size:721

Clone Sequence Records

BO31527.complete Sequence

721 bp assembled on 2012-04-18

GenBank Submission: KX795418

> BO31527.complete
GAAGTTATCAGTCGACATGATAAATTACCGCACACATGAACTGAGTGGTT
CGCCATCGATGCCCCGTCGCCGCCAGATCGGGCATACTTCCGGCCATTGT
AATGTGCGCTGCGATGGCTGCGGCAACAATAGGATGACCTTCTATCGCTA
CAAGTGCCTGCACTGCCTGGACTATGATCTTTGCTCCGACTGCAAGGAAA
ATGGGGTCTCAAACGGGTTGCACAGTCTGGATCATCCGCTCCAGTGCCTA
ATGGATCGTGATGCACTTGAGCTGCACTTCGCCGGTGAGCCGATTCCGAT
ATTGTGCGCCGACAGCTTCACGTGCCCAGTGTGCGGTGAAATGGGCTTTT
CCGTAGAGGATCTGAGGACGCACTGCCAAGATAATCATCGCATGGCGCGC
ACAGTTTGCATTTGCCCAGTCTGCGCGGCGGTCCCATTGTCGCAACCGAG
TCACATTGCTCACATTGCCAATCACTTGATGTTCTCGCCATCGCATCGCG
CTACAGGGGATCCGATGATCGATATCAGCGCCACTTCCCAGGCTGAGGGC
TCCAGTTTGCCCCAGAACTCTGCCGTGAGCTCTGGATCTGGCGCTCAACA
CACTTTTTCCAGCTCGGAAAATTCCCAGGTGCGCTTCCTTCTACCCGGAA
ACAGAGCTCCCTTAGCTGATTCCGACGATTTTAACATGGACAATTGGGAG
GTAGCAAGCTTTCTAGACCAT

BO31527.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG3526-RA 690 CG3526-PA 1..687 17..703 3435 100 Plus
CG3526-RC 666 CG3526-PC 2..663 42..703 3310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG3526-RA 1084 CG3526-RA 46..732 17..703 3435 100 Plus
CG3526-RC 860 CG3526-RC 115..776 42..703 3310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2893220..2893880 43..703 3305 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:04:27 has no hits.

BO31527.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:46 Download gff for BO31527.complete
Subject Subject Range Query Range Percent Splice Strand
CG3526-RA 46..732 17..705 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:03 Download gff for BO31527.complete
Subject Subject Range Query Range Percent Splice Strand
CG3526-RA 46..732 17..705 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:18 Download gff for BO31527.complete
Subject Subject Range Query Range Percent Splice Strand
CG3526-RA 46..732 17..705 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:18 Download gff for BO31527.complete
Subject Subject Range Query Range Percent Splice Strand
X 2893132..2893158 17..43 100 -> Plus
X 2893221..2893880 44..705 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:03 Download gff for BO31527.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2787165..2787191 17..43 100 -> Plus
arm_X 2787254..2787913 44..705 99   Plus

BO31527.pep Sequence

Translation from 16 to 721

> BO31527.pep
MINYRTHELSGSPSMPRRRQIGHTSGHCNVRCDGCGNNRMTFYRYKCLHC
LDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFAGEPIPILCADS
FTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHIAHI
ANHLMFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSSGSGAQHTFSSS
ENSQVRFLLPGNRAPLADSDDFNMDNWEVASFLDH

BO31527.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3526-PA 229 CG3526-PA 1..229 1..229 1263 100 Plus
CG3526-PC 221 CG3526-PC 1..221 9..229 1216 99.5 Plus
CG11984-PI 599 CG11984-PI 2..160 25..194 301 38 Plus
CG11984-PH 599 CG11984-PH 2..160 25..194 301 38 Plus
CG11984-PG 599 CG11984-PG 2..160 25..194 301 38 Plus