BO31527.complete Sequence
721 bp assembled on 2012-04-18
GenBank Submission: KX795418
> BO31527.complete
GAAGTTATCAGTCGACATGATAAATTACCGCACACATGAACTGAGTGGTT
CGCCATCGATGCCCCGTCGCCGCCAGATCGGGCATACTTCCGGCCATTGT
AATGTGCGCTGCGATGGCTGCGGCAACAATAGGATGACCTTCTATCGCTA
CAAGTGCCTGCACTGCCTGGACTATGATCTTTGCTCCGACTGCAAGGAAA
ATGGGGTCTCAAACGGGTTGCACAGTCTGGATCATCCGCTCCAGTGCCTA
ATGGATCGTGATGCACTTGAGCTGCACTTCGCCGGTGAGCCGATTCCGAT
ATTGTGCGCCGACAGCTTCACGTGCCCAGTGTGCGGTGAAATGGGCTTTT
CCGTAGAGGATCTGAGGACGCACTGCCAAGATAATCATCGCATGGCGCGC
ACAGTTTGCATTTGCCCAGTCTGCGCGGCGGTCCCATTGTCGCAACCGAG
TCACATTGCTCACATTGCCAATCACTTGATGTTCTCGCCATCGCATCGCG
CTACAGGGGATCCGATGATCGATATCAGCGCCACTTCCCAGGCTGAGGGC
TCCAGTTTGCCCCAGAACTCTGCCGTGAGCTCTGGATCTGGCGCTCAACA
CACTTTTTCCAGCTCGGAAAATTCCCAGGTGCGCTTCCTTCTACCCGGAA
ACAGAGCTCCCTTAGCTGATTCCGACGATTTTAACATGGACAATTGGGAG
GTAGCAAGCTTTCTAGACCAT
BO31527.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3526-RA | 690 | CG3526-PA | 1..687 | 17..703 | 3435 | 100 | Plus |
CG3526-RC | 666 | CG3526-PC | 2..663 | 42..703 | 3310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3526-RA | 1084 | CG3526-RA | 46..732 | 17..703 | 3435 | 100 | Plus |
CG3526-RC | 860 | CG3526-RC | 115..776 | 42..703 | 3310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2893220..2893880 | 43..703 | 3305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:04:27 has no hits.
BO31527.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:46 Download gff for
BO31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3526-RA | 46..732 | 17..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:03 Download gff for
BO31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3526-RA | 46..732 | 17..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:18 Download gff for
BO31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3526-RA | 46..732 | 17..705 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:18 Download gff for
BO31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2893132..2893158 | 17..43 | 100 | -> | Plus |
X | 2893221..2893880 | 44..705 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:03 Download gff for
BO31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2787165..2787191 | 17..43 | 100 | -> | Plus |
arm_X | 2787254..2787913 | 44..705 | 99 | | Plus |
BO31527.pep Sequence
Translation from 16 to 721
> BO31527.pep
MINYRTHELSGSPSMPRRRQIGHTSGHCNVRCDGCGNNRMTFYRYKCLHC
LDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFAGEPIPILCADS
FTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHIAHI
ANHLMFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSSGSGAQHTFSSS
ENSQVRFLLPGNRAPLADSDDFNMDNWEVASFLDH
BO31527.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3526-PA | 229 | CG3526-PA | 1..229 | 1..229 | 1263 | 100 | Plus |
CG3526-PC | 221 | CG3526-PC | 1..221 | 9..229 | 1216 | 99.5 | Plus |
CG11984-PI | 599 | CG11984-PI | 2..160 | 25..194 | 301 | 38 | Plus |
CG11984-PH | 599 | CG11984-PH | 2..160 | 25..194 | 301 | 38 | Plus |
CG11984-PG | 599 | CG11984-PG | 2..160 | 25..194 | 301 | 38 | Plus |