Clone BO31529 Report

Search the DGRC for BO31529

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG10041-RA
Protein status:BO31529.pep: Imported from assembly
Sequenced Size:895

Clone Sequence Records

BO31529.complete Sequence

895 bp assembled on 2012-04-19

GenBank Submission: KX799491

> BO31529.complete
GAAGTTATCAGTCGACATGTGTTGTTGGCAATCTCTTTGCTCCATAGCTT
GGTTCGCCGCGATGTCGGCAGCCCAGGAGACGCTTTCCGACACCCCGCAG
AATAGCACACCTTTGTTAGCCACAACTGTGTCGACCACGAAGGTGATAAG
TTTCCGCCCTCGTTATCCATACATCGTCTCCATAGGAGAGAACCTTAAAG
GATACTACAAGCACCTTTGCGTGGGCGTTATACTTTCGAATGAGTTCGTG
CTCAGTGCAGCCCACTGCATCCAAACGAATCCAACCAAACAACTGTACGT
GGCTGGTGGCGCCGATTCGCTGAACAGCCGGAAGCAGACCCGCTTCTTCG
TCGTGGAAAGAAGATGGCATCCCCAGTTTAGGGTGCTCGGCGGCAACGAC
ATTGCCGTGTTGAGGATTTACCCCAAATTCCCGCTCGACGATGTGCGATT
TCGTAGCATTAACTTTGCTGGAAAGCCTCAAAGGGATAGTGGCACCCAGG
CCTCGCTGGTTGGCTGGGGTCGGGTTGGCGTCGGCAAGATAAGAAAACTC
CAGGAGATGCCCTTCTTGACCATGGAGAACGATGAGTGCCAGCAAAGCCA
TCGCTTCGTTTTCCTCAAACCGCTTGACATCTGTGCGATGCATTTGAAAG
GACCGCGAGGTCCCTGCGACGGAGATTCTGGAGCTCCCTTGATGAATGTG
GCAAAAGAGAAGCTGTACGGATTACTTTCCTACGGTCGAAAAGCCTGCAC
CCCATTAAAACCCTATGCCTTCACTCGCATCAACGCATACTCCAGCTGGA
TTCAGGAATCCATGGACTCTATGGCTGCGAGATTAAAAGTCTTACAAATT
AATCGCACTGTATGGAAAGATGGGTTAGCAAGCTTTCTAGACCAT

BO31529.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:13:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG10041-RA 819 CG10041-PA 1..816 62..877 4080 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:13:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10041-RA 952 CG10041-RA 17..877 17..877 4305 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12351409..12352063 671..17 3275 100 Minus
3R 32079331 3R 12350890..12351096 877..671 1035 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:13:32 has no hits.

BO31529.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 12:16:01 Download gff for BO31529.complete
Subject Subject Range Query Range Percent Splice Strand
CG10041-RA 17..877 17..879 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:23 Download gff for BO31529.complete
Subject Subject Range Query Range Percent Splice Strand
CG10041-RA 17..877 17..879 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:19 Download gff for BO31529.complete
Subject Subject Range Query Range Percent Splice Strand
CG10041-RA 17..877 17..879 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:19 Download gff for BO31529.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12350886..12351096 671..879 99 <- Minus
3R 12351410..12352063 17..670 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:23 Download gff for BO31529.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8176608..8176818 671..879 99 <- Minus
arm_3R 8177132..8177785 17..670 100   Minus

BO31529.pep Sequence

Translation from 16 to 895

> BO31529.pep
MCCWQSLCSIAWFAAMSAAQETLSDTPQNSTPLLATTVSTTKVISFRPRY
PYIVSIGENLKGYYKHLCVGVILSNEFVLSAAHCIQTNPTKQLYVAGGAD
SLNSRKQTRFFVVERRWHPQFRVLGGNDIAVLRIYPKFPLDDVRFRSINF
AGKPQRDSGTQASLVGWGRVGVGKIRKLQEMPFLTMENDECQQSHRFVFL
KPLDICAMHLKGPRGPCDGDSGAPLMNVAKEKLYGLLSYGRKACTPLKPY
AFTRINAYSSWIQESMDSMAARLKVLQINRTVWKDGLASFLDH

BO31529.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG10041-PA 272 CG10041-PA 1..272 16..287 1434 100 Plus
CG12256-PA 283 CG12256-PA 60..282 51..266 289 32.3 Plus
CG17404-PB 275 CG17404-PB 48..269 51..262 258 33 Plus
CG3916-PA 267 CG3916-PA 23..267 35..272 254 29 Plus
CG16749-PA 265 CG16749-PA 5..265 5..270 230 27.5 Plus