BO31529.complete Sequence
895 bp assembled on 2012-04-19
GenBank Submission: KX799491
> BO31529.complete
GAAGTTATCAGTCGACATGTGTTGTTGGCAATCTCTTTGCTCCATAGCTT
GGTTCGCCGCGATGTCGGCAGCCCAGGAGACGCTTTCCGACACCCCGCAG
AATAGCACACCTTTGTTAGCCACAACTGTGTCGACCACGAAGGTGATAAG
TTTCCGCCCTCGTTATCCATACATCGTCTCCATAGGAGAGAACCTTAAAG
GATACTACAAGCACCTTTGCGTGGGCGTTATACTTTCGAATGAGTTCGTG
CTCAGTGCAGCCCACTGCATCCAAACGAATCCAACCAAACAACTGTACGT
GGCTGGTGGCGCCGATTCGCTGAACAGCCGGAAGCAGACCCGCTTCTTCG
TCGTGGAAAGAAGATGGCATCCCCAGTTTAGGGTGCTCGGCGGCAACGAC
ATTGCCGTGTTGAGGATTTACCCCAAATTCCCGCTCGACGATGTGCGATT
TCGTAGCATTAACTTTGCTGGAAAGCCTCAAAGGGATAGTGGCACCCAGG
CCTCGCTGGTTGGCTGGGGTCGGGTTGGCGTCGGCAAGATAAGAAAACTC
CAGGAGATGCCCTTCTTGACCATGGAGAACGATGAGTGCCAGCAAAGCCA
TCGCTTCGTTTTCCTCAAACCGCTTGACATCTGTGCGATGCATTTGAAAG
GACCGCGAGGTCCCTGCGACGGAGATTCTGGAGCTCCCTTGATGAATGTG
GCAAAAGAGAAGCTGTACGGATTACTTTCCTACGGTCGAAAAGCCTGCAC
CCCATTAAAACCCTATGCCTTCACTCGCATCAACGCATACTCCAGCTGGA
TTCAGGAATCCATGGACTCTATGGCTGCGAGATTAAAAGTCTTACAAATT
AATCGCACTGTATGGAAAGATGGGTTAGCAAGCTTTCTAGACCAT
BO31529.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:13:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10041-RA | 819 | CG10041-PA | 1..816 | 62..877 | 4080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:13:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10041-RA | 952 | CG10041-RA | 17..877 | 17..877 | 4305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:13:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12351409..12352063 | 671..17 | 3275 | 100 | Minus |
3R | 32079331 | 3R | 12350890..12351096 | 877..671 | 1035 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:13:32 has no hits.
BO31529.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 12:16:01 Download gff for
BO31529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10041-RA | 17..877 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:23 Download gff for
BO31529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10041-RA | 17..877 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:19 Download gff for
BO31529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10041-RA | 17..877 | 17..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:19 Download gff for
BO31529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12350886..12351096 | 671..879 | 99 | <- | Minus |
3R | 12351410..12352063 | 17..670 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:23 Download gff for
BO31529.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8176608..8176818 | 671..879 | 99 | <- | Minus |
arm_3R | 8177132..8177785 | 17..670 | 100 | | Minus |
BO31529.pep Sequence
Translation from 16 to 895
> BO31529.pep
MCCWQSLCSIAWFAAMSAAQETLSDTPQNSTPLLATTVSTTKVISFRPRY
PYIVSIGENLKGYYKHLCVGVILSNEFVLSAAHCIQTNPTKQLYVAGGAD
SLNSRKQTRFFVVERRWHPQFRVLGGNDIAVLRIYPKFPLDDVRFRSINF
AGKPQRDSGTQASLVGWGRVGVGKIRKLQEMPFLTMENDECQQSHRFVFL
KPLDICAMHLKGPRGPCDGDSGAPLMNVAKEKLYGLLSYGRKACTPLKPY
AFTRINAYSSWIQESMDSMAARLKVLQINRTVWKDGLASFLDH
BO31529.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10041-PA | 272 | CG10041-PA | 1..272 | 16..287 | 1434 | 100 | Plus |
CG12256-PA | 283 | CG12256-PA | 60..282 | 51..266 | 289 | 32.3 | Plus |
CG17404-PB | 275 | CG17404-PB | 48..269 | 51..262 | 258 | 33 | Plus |
CG3916-PA | 267 | CG3916-PA | 23..267 | 35..272 | 254 | 29 | Plus |
CG16749-PA | 265 | CG16749-PA | 5..265 | 5..270 | 230 | 27.5 | Plus |