BO31530.complete Sequence
865 bp assembled on 2012-04-18
GenBank Submission: KX796503
> BO31530.complete
GAAGTTATCAGTCGACATGCCCGTCTACGTCGGCCTGCTGATTAAGACTA
CGGCCCAACTGTTGTCGCATCCCATGGAGCTAGTTCGTGTGAATATGCAG
GCGAACGTAATCCACCATAGCCGTTTAAGCATAAACCATATGTTCCGGCT
GATGGCCCGTCATGGATTACCCGGATTTTATTACGGCATTGTGGCTGCTT
GTCTACGCTGTACTGTTCACACGATGTCAACGTACACGTTGTTCTACAAC
TTACAGGATAACAAGTACGTCCTAATGCTGCAGCCGTATAACACTAGCAT
GGTCCTGGGTATAACCGGATTTTGGGGCGGCGTATTGGCAACACCGTTCG
CCAAGCTGGCGGTCATTCGGCAAGCTGATCTTACGCGCGGATCCTACGAG
AGGCGCAACTATCGAAATTTCTGGAGAGGACTCAAATGTATGTACGCGAA
GGGAGGATTTACTTACCTATTTACCGGTTGGAAAATAAACTCGATTAGTA
GCACAGCCGTGGCCGTGCTGTATACTCCTATTAGTGATAAGGTCCATACA
GTGATATCATGGTTCCACAGACTCGACGAGCCGTGGCTTAGCGATCTCAT
AACTATGGCGCTAACAGGCAGTATTATCACAGTCATTATGACACCAGTGG
ATGCGTTGGCTACTCTAACGTTAAACGAATCCTCACACTATGGCCGCACT
TCCTATCCATATCTGTATCGGAAAATTATCCGAAAACATGGCTACAAGGG
CTTCTTTTTTGGATGGAAACCGGCACTAATGGCCCTTATCCCACATACTG
TTTTGGCAACGTTTGTATATCGCTTCTTACTAGATCGCTATATAACAGCA
AGCTTTCTAGACCAT
BO31530.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16736-RA | 834 | CG16736-PA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16736-RA | 908 | CG16736-RA | 39..869 | 17..847 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9256728..9257166 | 847..409 | 2195 | 100 | Minus |
3R | 32079331 | 3R | 9257287..9257678 | 408..17 | 1960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:04:45 has no hits.
BO31530.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:48 Download gff for
BO31530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16736-RA | 39..869 | 17..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:07 Download gff for
BO31530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16736-RA | 39..869 | 17..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:25 Download gff for
BO31530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16736-RA | 39..869 | 17..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:25 Download gff for
BO31530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9256726..9257166 | 409..849 | 99 | <- | Minus |
3R | 9257287..9257678 | 17..408 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:07 Download gff for
BO31530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5083009..5083400 | 17..408 | 100 | | Minus |
arm_3R | 5082448..5082888 | 409..849 | 99 | <- | Minus |
BO31530.pep Sequence
Translation from 16 to 865
> BO31530.pep
MPVYVGLLIKTTAQLLSHPMELVRVNMQANVIHHSRLSINHMFRLMARHG
LPGFYYGIVAACLRCTVHTMSTYTLFYNLQDNKYVLMLQPYNTSMVLGIT
GFWGGVLATPFAKLAVIRQADLTRGSYERRNYRNFWRGLKCMYAKGGFTY
LFTGWKINSISSTAVAVLYTPISDKVHTVISWFHRLDEPWLSDLITMALT
GSIITVIMTPVDALATLTLNESSHYGRTSYPYLYRKIIRKHGYKGFFFGW
KPALMALIPHTVLATFVYRFLLDRYITASFLDH
BO31530.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16736-PA | 277 | CG16736-PA | 1..277 | 1..277 | 1471 | 100 | Plus |
Dic1-PC | 280 | CG8790-PC | 11..268 | 4..268 | 229 | 29.2 | Plus |
Dic1-PA | 280 | CG8790-PA | 11..268 | 4..268 | 229 | 29.2 | Plus |
Dic1-PB | 280 | CG8790-PB | 11..268 | 4..268 | 229 | 29.2 | Plus |
Dic3-PA | 287 | CG11196-PA | 26..273 | 17..268 | 187 | 25 | Plus |