Clone BO31530 Report

Search the DGRC for BO31530

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG16736-RA
Protein status:BO31530.pep: Imported from assembly
Sequenced Size:865

Clone Sequence Records

BO31530.complete Sequence

865 bp assembled on 2012-04-18

GenBank Submission: KX796503

> BO31530.complete
GAAGTTATCAGTCGACATGCCCGTCTACGTCGGCCTGCTGATTAAGACTA
CGGCCCAACTGTTGTCGCATCCCATGGAGCTAGTTCGTGTGAATATGCAG
GCGAACGTAATCCACCATAGCCGTTTAAGCATAAACCATATGTTCCGGCT
GATGGCCCGTCATGGATTACCCGGATTTTATTACGGCATTGTGGCTGCTT
GTCTACGCTGTACTGTTCACACGATGTCAACGTACACGTTGTTCTACAAC
TTACAGGATAACAAGTACGTCCTAATGCTGCAGCCGTATAACACTAGCAT
GGTCCTGGGTATAACCGGATTTTGGGGCGGCGTATTGGCAACACCGTTCG
CCAAGCTGGCGGTCATTCGGCAAGCTGATCTTACGCGCGGATCCTACGAG
AGGCGCAACTATCGAAATTTCTGGAGAGGACTCAAATGTATGTACGCGAA
GGGAGGATTTACTTACCTATTTACCGGTTGGAAAATAAACTCGATTAGTA
GCACAGCCGTGGCCGTGCTGTATACTCCTATTAGTGATAAGGTCCATACA
GTGATATCATGGTTCCACAGACTCGACGAGCCGTGGCTTAGCGATCTCAT
AACTATGGCGCTAACAGGCAGTATTATCACAGTCATTATGACACCAGTGG
ATGCGTTGGCTACTCTAACGTTAAACGAATCCTCACACTATGGCCGCACT
TCCTATCCATATCTGTATCGGAAAATTATCCGAAAACATGGCTACAAGGG
CTTCTTTTTTGGATGGAAACCGGCACTAATGGCCCTTATCCCACATACTG
TTTTGGCAACGTTTGTATATCGCTTCTTACTAGATCGCTATATAACAGCA
AGCTTTCTAGACCAT

BO31530.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG16736-RA 834 CG16736-PA 1..831 17..847 4155 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG16736-RA 908 CG16736-RA 39..869 17..847 4155 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9256728..9257166 847..409 2195 100 Minus
3R 32079331 3R 9257287..9257678 408..17 1960 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:04:45 has no hits.

BO31530.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:48 Download gff for BO31530.complete
Subject Subject Range Query Range Percent Splice Strand
CG16736-RA 39..869 17..849 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:07 Download gff for BO31530.complete
Subject Subject Range Query Range Percent Splice Strand
CG16736-RA 39..869 17..849 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:25 Download gff for BO31530.complete
Subject Subject Range Query Range Percent Splice Strand
CG16736-RA 39..869 17..849 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:25 Download gff for BO31530.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9256726..9257166 409..849 99 <- Minus
3R 9257287..9257678 17..408 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:07 Download gff for BO31530.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5083009..5083400 17..408 100   Minus
arm_3R 5082448..5082888 409..849 99 <- Minus

BO31530.pep Sequence

Translation from 16 to 865

> BO31530.pep
MPVYVGLLIKTTAQLLSHPMELVRVNMQANVIHHSRLSINHMFRLMARHG
LPGFYYGIVAACLRCTVHTMSTYTLFYNLQDNKYVLMLQPYNTSMVLGIT
GFWGGVLATPFAKLAVIRQADLTRGSYERRNYRNFWRGLKCMYAKGGFTY
LFTGWKINSISSTAVAVLYTPISDKVHTVISWFHRLDEPWLSDLITMALT
GSIITVIMTPVDALATLTLNESSHYGRTSYPYLYRKIIRKHGYKGFFFGW
KPALMALIPHTVLATFVYRFLLDRYITASFLDH

BO31530.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG16736-PA 277 CG16736-PA 1..277 1..277 1471 100 Plus
Dic1-PC 280 CG8790-PC 11..268 4..268 229 29.2 Plus
Dic1-PA 280 CG8790-PA 11..268 4..268 229 29.2 Plus
Dic1-PB 280 CG8790-PB 11..268 4..268 229 29.2 Plus
Dic3-PA 287 CG11196-PA 26..273 17..268 187 25 Plus