Clone BO31532 Report

Search the DGRC for BO31532

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG13749-RB
Protein status:BO31532.pep: Imported from assembly
Sequenced Size:583

Clone Sequence Records

BO31532.complete Sequence

583 bp assembled on 2012-04-18

GenBank Submission: KX797360

> BO31532.complete
GAAGTTATCAGTCGACATGGTCTCGCCCAAACGGAGACTAATCGACGATT
CCATTGCTCCCTCAGCTGCCGATCTCCAGCGGACATACGACGGACATGAT
GGGCCTCACGTTTTCGGAACACCCGGCAATCAAGTCTACATTCGGGGGCA
GAACGATGGCGTATACAAGGTGCCAGGAGTAGGTGGTCAGTTCCATCACG
CATCGTCGCCAGCAGATCACGTCTATACGGATGAGCAGGGGATCACGTAT
GTGCACAAAAAAGACGCTGGAGGACCAGGAACACATACGCTTAGAGGACC
AGGTCTAGCTGCTGTACAGCCCGCCTACTCCACTGTGCAGCCTGCGGGAC
TTCGCAATCCCCAGTTTCATGTGGAGCGAAGTGGTCGCACTGTGGATGTT
GGTTCTGGAGGATTTGTCGTCCAAAGGAGCAGACGTAGTCCTCAGTTCCA
TGTGGAGCGTCCTGGTCGCACTGTGGATGTGGGTTCCGGAGGATTTTTTG
TCCAAAGGGGCAGGCGTAGTCCCCAGTTTCCTGTGGAGCGACCTTGGCAA
AGGGCTTTGAAGGACGCAAGCTTTCTAGACCAT

BO31532.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG13749-RB 552 CG13749-PB 1..549 17..565 2745 100 Plus
CG13749-RB 552 CG13749-PB 342..447 439..544 305 85.8 Plus
CG13749-RB 552 CG13749-PB 423..528 358..463 305 85.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG13749-RB 897 CG13749-RB 75..624 16..565 2750 100 Plus
CG13749-RB 897 CG13749-RB 417..522 439..544 305 85.8 Plus
CG13749-RB 897 CG13749-RB 498..603 358..463 305 85.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8933817..8934105 277..565 1445 100 Plus
2R 25286936 2R 8933497..8933760 16..279 1320 100 Plus
2R 25286936 2R 8933898..8934003 439..544 305 85.8 Plus
2R 25286936 2R 8933979..8934084 358..463 305 85.8 Plus
Blast to na_te.dros performed on 2014-11-28 05:05:08 has no hits.

BO31532.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:49 Download gff for BO31532.complete
Subject Subject Range Query Range Percent Splice Strand
CG13749-RB 76..624 17..567 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:10 Download gff for BO31532.complete
Subject Subject Range Query Range Percent Splice Strand
CG13749-RB 76..624 17..567 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:34 Download gff for BO31532.complete
Subject Subject Range Query Range Percent Splice Strand
CG13749-RB 76..624 17..567 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:34 Download gff for BO31532.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8933498..8933759 17..278 100 -> Plus
2R 8933819..8934105 279..567 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:10 Download gff for BO31532.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4821003..4821264 17..278 100 -> Plus
arm_2R 4821324..4821610 279..567 99   Plus

BO31532.pep Sequence

Translation from 16 to 583

> BO31532.pep
MVSPKRRLIDDSIAPSAADLQRTYDGHDGPHVFGTPGNQVYIRGQNDGVY
KVPGVGGQFHHASSPADHVYTDEQGITYVHKKDAGGPGTHTLRGPGLAAV
QPAYSTVQPAGLRNPQFHVERSGRTVDVGSGGFVVQRSRRSPQFHVERPG
RTVDVGSGGFFVQRGRRSPQFPVERPWQRALKDASFLDH

BO31532.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13749-PB 183 CG13749-PB 1..183 1..183 987 100 Plus
CG33470-PC 257 CG33470-PC 18..182 17..176 557 61.8 Plus
CG33470-PA 257 CG33470-PA 18..182 17..176 557 61.8 Plus
IM10-PC 257 CG18279-PC 18..182 17..176 557 61.8 Plus
IM10-PA 257 CG18279-PA 18..182 17..176 557 61.8 Plus