Clone BO31535 Report

Search the DGRC for BO31535

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:35
Vector:pDNR-Dual
Associated Gene/Transcriptix-RA
Protein status:BO31535.pep: Imported from assembly
Sequenced Size:598

Clone Sequence Records

BO31535.complete Sequence

598 bp assembled on 2012-04-18

GenBank Submission: KX796014

> BO31535.complete
GAAGTTATCAGTCGATATGAATCCCAACATGAACATGATGCCCATGTCTG
GGCCACAAATGATGCAGGTAATGCAATCCTCGCCATCGGGACCCCCAGGA
CCAGTGCAGCATCAACAGCAGCAGCCTCCACAGCCACTGCAGCAGCAGCA
GCAGGCCGAAAAATTGGACAACATTTCCAGGGTGAAGAGTTTGCTGGGAC
CACTGCGGGAGTCCATGTTCCTCACCATCCGGTCGAGCGCCTTCGCGCTG
CAGCAAAACAATCTCGCGGACAACTTAAAGAGGGACACGGGTGCCCACCA
TGTTCCGCGGTTCGACAAGCACTTGGAAGACTTTTACGCCTGTTGCGACC
AGATCGAGATCCACTTGAAGACGGCGATGCAGTGCCTCCAGCAGCAGAAC
TCCTCCAATCACTATCTCCCCGGTCCGGTGACTCCCATGCGCATGGAGAC
CTTTATGCCGGACAACGCCGGCCCCATTTCGTATCCCACTTACTTGAACA
CGGTCCGCGTTCACATACAGTCCGCCAAGGATATACACGACACTCTGATT
AGTGCCGCGCAGAACATTTCGCAGGCTGATGCAAGCTTTCTAGACCAT

BO31535.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
ix-RA 567 CG13201-PA 1..564 17..580 2820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
ix-RA 727 CG13201-RA 79..642 17..580 2820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11359522..11360085 580..17 2820 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:04:04 has no hits.

BO31535.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:44 Download gff for BO31535.complete
Subject Subject Range Query Range Percent Splice Strand
ix-RA 79..642 17..582 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:58 Download gff for BO31535.complete
Subject Subject Range Query Range Percent Splice Strand
ix-RA 79..642 17..582 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:07 Download gff for BO31535.complete
Subject Subject Range Query Range Percent Splice Strand
ix-RA 79..642 17..582 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:07 Download gff for BO31535.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11359519..11360085 17..582 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:58 Download gff for BO31535.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7247024..7247590 17..582 99   Minus

BO31535.pep Sequence

Translation from 16 to 598

> BO31535.pep
MNPNMNMMPMSGPQMMQVMQSSPSGPPGPVQHQQQQPPQPLQQQQQAEKL
DNISRVKSLLGPLRESMFLTIRSSAFALQQNNLADNLKRDTGAHHVPRFD
KHLEDFYACCDQIEIHLKTAMQCLQQQNSSNHYLPGPVTPMRMETFMPDN
AGPISYPTYLNTVRVHIQSAKDIHDTLISAAQNISQADASFLDH

BO31535.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:14
Subject Length Description Subject Range Query Range Score Percent Strand
ix-PA 188 CG13201-PA 1..188 1..188 996 100 Plus