BO31539.complete Sequence
775 bp assembled on 2012-04-18
GenBank Submission: KX796490
> BO31539.complete
GAAGTTATCAGTCGACATGTTCTTATTAAACATTCCTTGGAGTGGACACA
CTGGCCGCACGGCTTTTCACATTGTCATTTTCCAGGAGCTAGGCGTTGAA
AATTTGTTAAAAATGTCCCAATCAAAGGTTCCTCATATTGTGGGCGATGA
TGATGAATATCAAGAAGCTACTGCTCCCGAAAGTGACGAGATTACCTGCG
AGTCTTCTGTGGAAAGTGATCAAGATGATGACTGTTCCAACGAAGATGAT
ATGGATTTGGATGGGGCAGACTGGTCCCCATATGTCACTTATGAGGCGGG
TACACCAAGACGTCCCCACAGTGCTTTGGAGATTACCGAAATTACCGAGT
TTCCGAAAATTCCAAAGAAAAACCCCACCTCACCCGAACTGGTGATACAG
AAGCCAGAGACTCCGGATCAAAACGACTCGGGATCTCAGGAGCGTCTCAC
CTTCTCTCGCGCCAATAATGCGCTATCAGAGTCCATTGGAGCTCGCGTTT
CCCAACGTAGCAGGGGCAACTTGGAACCATTCATCCGTAGAATGGCACGT
AGCCCTACGCCCGAGGCCTCAGAGGAAAACGGCTCGGTATCACAAGGTCA
GCTGCTGGCCAAGCCCGTGGATGTCACCGAGTTCTTTCACCGCATTGCTG
TGGGTCTCGTCGAGCAGCGCGTCTGCTTGAAGCCTTTCTTGGCATTGCGC
AAACATATTGCTCAACTGGTGGGTCAGACTTTGAAGAAATCCAAGAGGAT
GCGCCGTGCAAGCTTTCTAGACCAT
BO31539.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:06:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14932-RB | 648 | CG14932-PB | 1..645 | 113..757 | 3225 | 100 | Plus |
CG14932-RC | 609 | CG14932-PC | 99..606 | 250..757 | 2540 | 100 | Plus |
CG14932-RC | 609 | CG14932-PC | 1..98 | 113..210 | 490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:06:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14932-RB | 808 | CG14932-RB | 1..730 | 28..757 | 3650 | 100 | Plus |
CG14932-RC | 769 | CG14932-RC | 184..691 | 250..757 | 2540 | 100 | Plus |
CG14932-RC | 769 | CG14932-RC | 1..183 | 28..210 | 915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:06:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11790483..11790933 | 307..757 | 2255 | 100 | Plus |
2L | 23513712 | 2L | 11789908..11790007 | 17..116 | 500 | 100 | Plus |
2L | 23513712 | 2L | 11790059..11790115 | 115..171 | 285 | 100 | Plus |
2L | 23513712 | 2L | 11790370..11790426 | 250..306 | 285 | 100 | Plus |
2L | 23513712 | 2L | 11790172..11790215 | 168..211 | 205 | 97.7 | Plus |
2L | 23513712 | 2L | 11790272..11790310 | 211..249 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:06:29 has no hits.
BO31539.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:54 Download gff for
BO31539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14932-RB | 126..861 | 22..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:21 Download gff for
BO31539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14932-RB | 37..772 | 22..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:02 Download gff for
BO31539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14932-RB | 1..730 | 28..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:02 Download gff for
BO31539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11790370..11790426 | 250..306 | 100 | -> | Plus |
2L | 11789913..11790005 | 22..114 | 100 | -> | Plus |
2L | 11790059..11790115 | 115..171 | 100 | -> | Plus |
2L | 11790176..11790214 | 172..210 | 100 | -> | Plus |
2L | 11790272..11790310 | 211..249 | 100 | -> | Plus |
2L | 11790483..11790933 | 307..759 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:21 Download gff for
BO31539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11789913..11790005 | 22..114 | 100 | -> | Plus |
arm_2L | 11790059..11790115 | 115..171 | 100 | -> | Plus |
arm_2L | 11790176..11790214 | 172..210 | 100 | -> | Plus |
arm_2L | 11790272..11790310 | 211..249 | 100 | -> | Plus |
arm_2L | 11790370..11790426 | 250..306 | 100 | -> | Plus |
arm_2L | 11790483..11790933 | 307..759 | 99 | | Plus |
BO31539.pep Sequence
Translation from 16 to 775
> BO31539.pep
MFLLNIPWSGHTGRTAFHIVIFQELGVENLLKMSQSKVPHIVGDDDEYQE
ATAPESDEITCESSVESDQDDDCSNEDDMDLDGADWSPYVTYEAGTPRRP
HSALEITEITEFPKIPKKNPTSPELVIQKPETPDQNDSGSQERLTFSRAN
NALSESIGARVSQRSRGNLEPFIRRMARSPTPEASEENGSVSQGQLLAKP
VDVTEFFHRIAVGLVEQRVCLKPFLALRKHIAQLVGQTLKKSKRMRRASF
LDH
BO31539.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14932-PB | 215 | CG14932-PB | 1..215 | 33..247 | 1109 | 100 | Plus |
CG14932-PC | 202 | CG14932-PC | 1..202 | 33..247 | 1011 | 94 | Plus |