Clone BO31539 Report

Search the DGRC for BO31539

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:39
Vector:pDNR-Dual
Associated Gene/TranscriptCG14932-RB
Protein status:BO31539.pep: Imported from assembly
Sequenced Size:775

Clone Sequence Records

BO31539.complete Sequence

775 bp assembled on 2012-04-18

GenBank Submission: KX796490

> BO31539.complete
GAAGTTATCAGTCGACATGTTCTTATTAAACATTCCTTGGAGTGGACACA
CTGGCCGCACGGCTTTTCACATTGTCATTTTCCAGGAGCTAGGCGTTGAA
AATTTGTTAAAAATGTCCCAATCAAAGGTTCCTCATATTGTGGGCGATGA
TGATGAATATCAAGAAGCTACTGCTCCCGAAAGTGACGAGATTACCTGCG
AGTCTTCTGTGGAAAGTGATCAAGATGATGACTGTTCCAACGAAGATGAT
ATGGATTTGGATGGGGCAGACTGGTCCCCATATGTCACTTATGAGGCGGG
TACACCAAGACGTCCCCACAGTGCTTTGGAGATTACCGAAATTACCGAGT
TTCCGAAAATTCCAAAGAAAAACCCCACCTCACCCGAACTGGTGATACAG
AAGCCAGAGACTCCGGATCAAAACGACTCGGGATCTCAGGAGCGTCTCAC
CTTCTCTCGCGCCAATAATGCGCTATCAGAGTCCATTGGAGCTCGCGTTT
CCCAACGTAGCAGGGGCAACTTGGAACCATTCATCCGTAGAATGGCACGT
AGCCCTACGCCCGAGGCCTCAGAGGAAAACGGCTCGGTATCACAAGGTCA
GCTGCTGGCCAAGCCCGTGGATGTCACCGAGTTCTTTCACCGCATTGCTG
TGGGTCTCGTCGAGCAGCGCGTCTGCTTGAAGCCTTTCTTGGCATTGCGC
AAACATATTGCTCAACTGGTGGGTCAGACTTTGAAGAAATCCAAGAGGAT
GCGCCGTGCAAGCTTTCTAGACCAT

BO31539.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14932-RB 648 CG14932-PB 1..645 113..757 3225 100 Plus
CG14932-RC 609 CG14932-PC 99..606 250..757 2540 100 Plus
CG14932-RC 609 CG14932-PC 1..98 113..210 490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14932-RB 808 CG14932-RB 1..730 28..757 3650 100 Plus
CG14932-RC 769 CG14932-RC 184..691 250..757 2540 100 Plus
CG14932-RC 769 CG14932-RC 1..183 28..210 915 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11790483..11790933 307..757 2255 100 Plus
2L 23513712 2L 11789908..11790007 17..116 500 100 Plus
2L 23513712 2L 11790059..11790115 115..171 285 100 Plus
2L 23513712 2L 11790370..11790426 250..306 285 100 Plus
2L 23513712 2L 11790172..11790215 168..211 205 97.7 Plus
2L 23513712 2L 11790272..11790310 211..249 195 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:06:29 has no hits.

BO31539.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:54 Download gff for BO31539.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 126..861 22..759 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:21 Download gff for BO31539.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 37..772 22..759 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:02 Download gff for BO31539.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 1..730 28..759 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:02 Download gff for BO31539.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11790370..11790426 250..306 100 -> Plus
2L 11789913..11790005 22..114 100 -> Plus
2L 11790059..11790115 115..171 100 -> Plus
2L 11790176..11790214 172..210 100 -> Plus
2L 11790272..11790310 211..249 100 -> Plus
2L 11790483..11790933 307..759 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:21 Download gff for BO31539.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11789913..11790005 22..114 100 -> Plus
arm_2L 11790059..11790115 115..171 100 -> Plus
arm_2L 11790176..11790214 172..210 100 -> Plus
arm_2L 11790272..11790310 211..249 100 -> Plus
arm_2L 11790370..11790426 250..306 100 -> Plus
arm_2L 11790483..11790933 307..759 99   Plus

BO31539.pep Sequence

Translation from 16 to 775

> BO31539.pep
MFLLNIPWSGHTGRTAFHIVIFQELGVENLLKMSQSKVPHIVGDDDEYQE
ATAPESDEITCESSVESDQDDDCSNEDDMDLDGADWSPYVTYEAGTPRRP
HSALEITEITEFPKIPKKNPTSPELVIQKPETPDQNDSGSQERLTFSRAN
NALSESIGARVSQRSRGNLEPFIRRMARSPTPEASEENGSVSQGQLLAKP
VDVTEFFHRIAVGLVEQRVCLKPFLALRKHIAQLVGQTLKKSKRMRRASF
LDH

BO31539.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14932-PB 215 CG14932-PB 1..215 33..247 1109 100 Plus
CG14932-PC 202 CG14932-PC 1..202 33..247 1011 94 Plus