Clone BO31543 Report

Search the DGRC for BO31543

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG12164-RA
Protein status:BO31543.pep: Imported from assembly
Sequenced Size:1021

Clone Sequence Records

BO31543.complete Sequence

1021 bp assembled on 2012-04-18

GenBank Submission: KX797792

> BO31543.complete
GAAGTTATCAGTCGACATGAGATCCCTAAGTCTGTTGCTACTCAGCGCCA
GCTGCGCGCTAATCATAAGCTTAGCCTACGCCCATCCCCCCGAGGGAGTG
TGGAAGAAGAAGCTCACCTGGAAGGAGGATTGGGTCCAGGTGTGGAAGAC
CGTTAAGAAGGAGGCGTGGGAAACCAAGTGGAAGAAGGTTTCGGTCCCAA
TATGGAAGGAAGTCAAGGTTCCCGTCTGGAAGGAGGAGAAGGTTCCCGAC
TGGAAGATCGTAAAGAAGCCGAAAATTGAGGAGAGAGAGGTGCCTGCCTG
GAAGGAGGTTAAGGTGGCCGAATGGAAGAAGATAACGAAACCCATTTGGG
TGCCCACAAAGGTCGCCGTCTGGAAGGAAATCCAGGTGCCCATTTGGAAG
GAAGTGCAGGTCCCGTACTGGAAGGAAATACAAGTGCCCATTTGGAAGGA
AGTACAGGTCGCAGACTGGAAGCAAATGTTTGAGCCCCAATGGGTGAAAA
TGGGCATTCCCGGCGAAAAGTTCTTGGGTAAGGACCACGAGGGCTGGGAG
TACACCAGCCACGATCTCTGGCGCAAGAAGCTGATCTGGAAGCCCGTGTG
GAAGAAGGTCTGGCGCACCGAGAAGAAGCAGGAGTGGAAGACCGAGAAGA
AGCAGGAGTGGCGCACCGAGAAGAAGCAGGAATGGAAGACGGAGAAGGTG
CAGGAGTGGAAGCAGGACAAGAAGCTGGAGTGGAAGGACGAGTGGATCCA
GGTGTGGAAGCCCGTGAAGAAACAAATCTGGATTAAGGAGAAGCGCGAGA
CCTGGATCGAGGAGAAGGTTCAGATCTGGCGCACCGAGAAGCGCCAGGTG
TGGGCCACCGAGAAGCGGCAGGCGTGGAAGGACGAGTGGCAGTCGGTCAA
CGTGCCCGTCTGGAAGGAGGTCAAGGTGCAGGAGTGGAAGAAGGTGTGGA
AGCCCGTCTGGGAGAAGGTGTGGGTGCCAGTGAGCCATGGCCACGGATGG
GACGCAAGCTTTCTAGACCAT

BO31543.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG12164-RB 990 CG12164-PB 1..987 17..1003 4935 100 Plus
CG12164-RA 990 CG12164-PA 1..987 17..1003 4935 100 Plus
CG12164-RB 990 CG12164-PB 625..720 617..712 225 82.3 Plus
CG12164-RB 990 CG12164-PB 601..696 641..736 225 82.3 Plus
CG12164-RA 990 CG12164-PA 601..696 641..736 225 82.3 Plus
CG12164-RA 990 CG12164-PA 625..720 617..712 225 82.3 Plus
CG12164-RB 990 CG12164-PB 571..697 635..761 215 78 Plus
CG12164-RB 990 CG12164-PB 619..745 587..713 215 78 Plus
CG12164-RA 990 CG12164-PA 571..697 635..761 215 78 Plus
CG12164-RA 990 CG12164-PA 619..745 587..713 215 78 Plus
CG15615-RB 1092 CG15615-PB 496..606 503..613 210 79.3 Plus
CG12164-RB 990 CG12164-PB 354..413 418..477 195 88.3 Plus
CG12164-RB 990 CG12164-PB 402..461 370..429 195 88.3 Plus
CG12164-RA 990 CG12164-PA 354..413 418..477 195 88.3 Plus
CG12164-RA 990 CG12164-PA 402..461 370..429 195 88.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG12164-RB 1554 CG12164-RB 88..1075 16..1003 4940 100 Plus
CG12164-RA 1404 CG12164-RA 88..1075 16..1003 4940 100 Plus
CG12164-RB 1554 CG12164-RB 689..784 641..736 225 82.3 Plus
CG12164-RB 1554 CG12164-RB 713..808 617..712 225 82.3 Plus
CG12164-RA 1404 CG12164-RA 689..784 641..736 225 82.3 Plus
CG12164-RA 1404 CG12164-RA 713..808 617..712 225 82.3 Plus
CG12164-RB 1554 CG12164-RB 707..833 587..713 215 78 Plus
CG12164-RB 1554 CG12164-RB 659..785 635..761 215 78 Plus
CG12164-RA 1404 CG12164-RA 659..785 635..761 215 78 Plus
CG12164-RA 1404 CG12164-RA 707..833 587..713 215 78 Plus
CG15615-RB 1429 CG15615-RB 644..754 503..613 210 79.3 Plus
CG12164-RB 1554 CG12164-RB 442..501 418..477 195 88.3 Plus
CG12164-RB 1554 CG12164-RB 490..549 370..429 195 88.3 Plus
CG12164-RA 1404 CG12164-RA 442..501 418..477 195 88.3 Plus
CG12164-RA 1404 CG12164-RA 490..549 370..429 195 88.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7312506..7313016 493..1003 2555 100 Plus
2R 25286936 2R 7312174..7312453 216..495 1400 100 Plus
2R 25286936 2R 7311931..7312113 37..219 915 100 Plus
2R 25286936 2R 7312630..7312725 641..736 225 82.3 Plus
2R 25286936 2R 7312654..7312749 617..712 225 82.3 Plus
2R 25286936 2R 7312600..7312726 635..761 215 78 Plus
2R 25286936 2R 7312648..7312774 587..713 215 78 Plus
2R 25286936 2R 7312328..7312387 418..477 195 88.3 Plus
2R 25286936 2R 7312376..7312435 370..429 195 88.3 Plus
2R 25286936 2R 16793966..16794028 565..503 195 87.3 Minus
Blast to na_te.dros performed on 2014-11-28 05:07:05 has no hits.

BO31543.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:57 Download gff for BO31543.complete
Subject Subject Range Query Range Percent Splice Strand
CG12164-RA 76..1062 17..1005 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:27 Download gff for BO31543.complete
Subject Subject Range Query Range Percent Splice Strand
CG12164-RA 89..1075 17..1005 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:15 Download gff for BO31543.complete
Subject Subject Range Query Range Percent Splice Strand
CG12164-RA 89..1075 17..1005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:15 Download gff for BO31543.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7311483..7311503 17..37 100 -> Plus
2R 7311932..7312111 38..217 100 -> Plus
2R 7312176..7312451 218..493 100 -> Plus
2R 7312507..7313016 494..1005 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:27 Download gff for BO31543.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3198988..3199008 17..37 100 -> Plus
arm_2R 3199437..3199616 38..217 100 -> Plus
arm_2R 3199681..3199956 218..493 100 -> Plus
arm_2R 3200012..3200521 494..1005 99   Plus

BO31543.pep Sequence

Translation from 16 to 1021

> BO31543.pep
MRSLSLLLLSASCALIISLAYAHPPEGVWKKKLTWKEDWVQVWKTVKKEA
WETKWKKVSVPIWKEVKVPVWKEEKVPDWKIVKKPKIEEREVPAWKEVKV
AEWKKITKPIWVPTKVAVWKEIQVPIWKEVQVPYWKEIQVPIWKEVQVAD
WKQMFEPQWVKMGIPGEKFLGKDHEGWEYTSHDLWRKKLIWKPVWKKVWR
TEKKQEWKTEKKQEWRTEKKQEWKTEKVQEWKQDKKLEWKDEWIQVWKPV
KKQIWIKEKRETWIEEKVQIWRTEKRQVWATEKRQAWKDEWQSVNVPVWK
EVKVQEWKKVWKPVWEKVWVPVSHGHGWDASFLDH

BO31543.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG12164-PB 329 CG12164-PB 1..329 1..329 1888 100 Plus
CG12164-PA 329 CG12164-PA 1..329 1..329 1888 100 Plus
CG15615-PB 363 CG15615-PB 74..272 21..271 606 44.2 Plus
CG15615-PB 363 CG15615-PB 75..279 88..326 385 33.5 Plus